ID A0A2G5SVF4_9PELO Unreviewed; 323 AA.
AC A0A2G5SVF4;
DT 31-JAN-2018, integrated into UniProtKB/TrEMBL.
DT 31-JAN-2018, sequence version 1.
DT 27-MAR-2024, entry version 18.
DE RecName: Full=Tc1-like transposase DDE domain-containing protein {ECO:0008006|Google:ProtNLM};
GN Name=Cnig_chr_X.g24569 {ECO:0000313|EMBL:PIC18806.1};
GN ORFNames=B9Z55_024569 {ECO:0000313|EMBL:PIC18806.1};
OS Caenorhabditis nigoni.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
OC Caenorhabditis.
OX NCBI_TaxID=1611254 {ECO:0000313|EMBL:PIC18806.1, ECO:0000313|Proteomes:UP000230233};
RN [1] {ECO:0000313|Proteomes:UP000230233}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=JU1422 {ECO:0000313|Proteomes:UP000230233};
RA Yin D., Schwarz E.M., Thomas C.G., Felde R.L., Korf I.F., Cutter A.D.,
RA Schartner C.M., Ralston E.J., Meyer B.J., Haag E.S.;
RT "Rapid genome shrinkage in a self-fertile nematode reveals novel sperm
RT competition proteins.";
RL Submitted (OCT-2017) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PIC18806.1}.
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DR EMBL; PDUG01000006; PIC18806.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2G5SVF4; -.
DR STRING; 1611254.A0A2G5SVF4; -.
DR Proteomes; UP000230233; Chromosome x.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR InterPro; IPR038717; Tc1-like_DDE_dom.
DR InterPro; IPR025898; Tc3_transposase_DNA-bd_dom.
DR InterPro; IPR048703; Tnp_Tc3-like_HTH.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR PANTHER; PTHR23022:SF138; TRANSPOSABLE ELEMENT TC3 TRANSPOSASE; 1.
DR PANTHER; PTHR23022; TRANSPOSABLE ELEMENT-RELATED; 1.
DR Pfam; PF13358; DDE_3; 1.
DR Pfam; PF11427; HTH_Tnp_Tc3_1; 1.
DR Pfam; PF21517; HTH_Tnp_Tc3_2_like; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000230233};
KW Transposable element {ECO:0000256|ARBA:ARBA00022464}.
FT DOMAIN 10..57
FT /note="Tc3 transposase DNA binding"
FT /evidence="ECO:0000259|Pfam:PF11427"
FT DOMAIN 71..109
FT /note="Transposable element Tc3 transposase-like DNA-
FT binding HTH"
FT /evidence="ECO:0000259|Pfam:PF21517"
FT DOMAIN 147..287
FT /note="Tc1-like transposase DDE"
FT /evidence="ECO:0000259|Pfam:PF13358"
SQ SEQUENCE 323 AA; 37691 MW; D014244753F00B82 CRC64;
MTIPPGRPCR AQALTQFEQG RIQGLNDAGL SNREVARRLG RSHKVVNSYL QDPAAYGNRK
HTGRPSKLSD RERRSILREA SNSTYSARQI QSHLNLGVSA KTIVRVIHKC KFIVRRRMRK
APFITIQHRQ SRLAFAQKNA RRDWSKIVWS DEKRFNYDGP DGNRAYWHDL RKDNLRFSRR
NYKGGSVLVW ACFGAKGRIK LVFGPRTIKT MSYLYILKKA LLPYWKKHRQ DNLTFMQDNA
PPHVSRISRK WFEKNKIELL SWPANSPDLN PQENIWGILA RRVYENNKQY HSTAGLKKAI
VKAWHTIDQT IVDNLVMSMD TRV
//
