ID A0A2G5SX39_9PELO Unreviewed; 627 AA.
AC A0A2G5SX39;
DT 31-JAN-2018, integrated into UniProtKB/TrEMBL.
DT 31-JAN-2018, sequence version 1.
DT 27-MAR-2024, entry version 20.
DE RecName: Full=Nuclear receptor domain-containing protein {ECO:0008006|Google:ProtNLM};
GN Name=Cni-nhr-25 {ECO:0000313|EMBL:PIC19411.1};
GN Synonyms=Cnig_chr_X.g24975 {ECO:0000313|EMBL:PIC19411.1};
GN ORFNames=B9Z55_024975 {ECO:0000313|EMBL:PIC19411.1};
OS Caenorhabditis nigoni.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
OC Caenorhabditis.
OX NCBI_TaxID=1611254 {ECO:0000313|EMBL:PIC19411.1, ECO:0000313|Proteomes:UP000230233};
RN [1] {ECO:0000313|Proteomes:UP000230233}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=JU1422 {ECO:0000313|Proteomes:UP000230233};
RA Yin D., Schwarz E.M., Thomas C.G., Felde R.L., Korf I.F., Cutter A.D.,
RA Schartner C.M., Ralston E.J., Meyer B.J., Haag E.S.;
RT "Rapid genome shrinkage in a self-fertile nematode reveals novel sperm
RT competition proteins.";
RL Submitted (OCT-2017) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123,
CC ECO:0000256|RuleBase:RU004334}.
CC -!- SIMILARITY: Belongs to the nuclear hormone receptor family.
CC {ECO:0000256|RuleBase:RU004334}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PIC19411.1}.
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DR EMBL; PDUG01000006; PIC19411.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2G5SX39; -.
DR Proteomes; UP000230233; Chromosome x.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0004879; F:nuclear receptor activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR CDD; cd07167; NR_DBD_Lrh-1_like; 1.
DR CDD; cd06930; NR_LBD_F2; 1.
DR Gene3D; 3.30.50.10; Erythroid Transcription Factor GATA-1, subunit A; 1.
DR Gene3D; 1.10.565.10; Retinoid X Receptor; 1.
DR InterPro; IPR035500; NHR-like_dom_sf.
DR InterPro; IPR016355; NR5-like.
DR InterPro; IPR000536; Nucl_hrmn_rcpt_lig-bd.
DR InterPro; IPR001723; Nuclear_hrmn_rcpt.
DR InterPro; IPR001628; Znf_hrmn_rcpt.
DR InterPro; IPR013088; Znf_NHR/GATA.
DR PANTHER; PTHR24086:SF15; NUCLEAR HORMONE RECEPTOR FTZ-F1; 1.
DR PANTHER; PTHR24086; NUCLEAR RECEPTOR SUBFAMILY 5 GROUP A; 1.
DR Pfam; PF00104; Hormone_recep; 1.
DR Pfam; PF00105; zf-C4; 1.
DR PRINTS; PR00398; STRDHORMONER.
DR PRINTS; PR00047; STROIDFINGER.
DR SMART; SM00430; HOLI; 1.
DR SMART; SM00399; ZnF_C4; 1.
DR SUPFAM; SSF57716; Glucocorticoid receptor-like (DNA-binding domain); 1.
DR SUPFAM; SSF48508; Nuclear receptor ligand-binding domain; 1.
DR PROSITE; PS51843; NR_LBD; 1.
DR PROSITE; PS00031; NUCLEAR_REC_DBD_1; 1.
DR PROSITE; PS51030; NUCLEAR_REC_DBD_2; 1.
PE 3: Inferred from homology;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125, ECO:0000256|RuleBase:RU004334};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723,
KW ECO:0000256|RuleBase:RU004334};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242, ECO:0000256|RuleBase:RU004334};
KW Receptor {ECO:0000256|ARBA:ARBA00023170, ECO:0000256|RuleBase:RU004334};
KW Reference proteome {ECO:0000313|Proteomes:UP000230233};
KW Transcription {ECO:0000256|ARBA:ARBA00023163,
KW ECO:0000256|RuleBase:RU004334};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015,
KW ECO:0000256|RuleBase:RU004334};
KW Zinc {ECO:0000256|ARBA:ARBA00022833, ECO:0000256|RuleBase:RU004334};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|RuleBase:RU004334}.
FT DOMAIN 80..155
FT /note="Nuclear receptor"
FT /evidence="ECO:0000259|PROSITE:PS51030"
FT DOMAIN 365..627
FT /note="NR LBD"
FT /evidence="ECO:0000259|PROSITE:PS51843"
SQ SEQUENCE 627 AA; 71170 MW; 329CD491E141D17F CRC64;
MIETTTPPST PTVMRIEKKR QRFQLNISGP GVDLQLQPAS IQSPHIGSRW RIHWSNTDGG
VLRRQMTDVE RMVLRPNHEG EQCPVCGDRV SGYHYGLLTC ESCKGFFKRT VQNKKQYQCS
ADANCHVDRT CRKRCPSCRF QKCLTMGMKM EAVRADRMRG GRNKFGSFYK RDRAHRLQRN
AMRVTVIPSS GITSQPQTFY TPADHQVSSS TTDQNTHIHY YDQTKVKTEF IKTEYDAHLQ
SPTLSSSTNQ QISDFIMRPG YLVDHQDSIA ALLNTTNEDH LLRFPTTYPL AEVKQEPFDY
SEHHFVHHPL LEYQGYTSTA NYAPMMPIPT VTTAQSVVTS TSSTTTGRVA EQTRTSPVLP
LCPAPTEKTV DHFYNSNMAE MCKTLPDDSQ IIRIFNAAKG IKGEAHSFAV TVADENLKVI
VDWAKNNQLF GKLQLDDQMN LLQTSWSTVH LVDITNAMIH GNLSPTYKIT TGEDVSVGAV
ALLGYRLYVN TWNDIVNRLR NMGFTKFDYC AFRFLALFDQ SMDHFQAVST ARSRVLQAWA
EVRCSFVSGF MSIFEEIRRL SHDAVRYLWS LQSNFPELWA SLRPDTSLVL EMIKTSATRP
TDVTSTVPHI SVPLQQTTYA PVVYMTS
//
