ID A0A2G5THA1_9PELO Unreviewed; 299 AA.
AC A0A2G5THA1;
DT 31-JAN-2018, integrated into UniProtKB/TrEMBL.
DT 31-JAN-2018, sequence version 1.
DT 27-MAR-2024, entry version 21.
DE RecName: Full=Nematode cuticle collagen N-terminal domain-containing protein {ECO:0000259|SMART:SM01088};
GN Name=Cnig_chr_V.g19157 {ECO:0000313|EMBL:PIC26640.1};
GN Synonyms=Cnig_chr_V.g19183 {ECO:0000313|EMBL:PIC26680.1};
GN ORFNames=B9Z55_019157 {ECO:0000313|EMBL:PIC26640.1}, B9Z55_019183
GN {ECO:0000313|EMBL:PIC26680.1};
OS Caenorhabditis nigoni.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
OC Caenorhabditis.
OX NCBI_TaxID=1611254 {ECO:0000313|EMBL:PIC26640.1, ECO:0000313|Proteomes:UP000230233};
RN [1] {ECO:0000313|Proteomes:UP000230233}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=JU1422 {ECO:0000313|Proteomes:UP000230233};
RA Yin D., Schwarz E.M., Thomas C.G., Felde R.L., Korf I.F., Cutter A.D.,
RA Schartner C.M., Ralston E.J., Meyer B.J., Haag E.S.;
RT "Rapid genome shrinkage in a self-fertile nematode reveals novel sperm
RT competition proteins.";
RL Submitted (OCT-2017) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:PIC26640.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=JU1422 {ECO:0000313|EMBL:PIC26640.1};
RX PubMed=29302007; DOI=10.1126/science.aao0827;
RA Yin D., Schwarz E.M., Thomas C.G., Felde R.L., Korf I.F., Cutter A.D.,
RA Schartner C.M., Ralston E.J., Meyer B.J., Haag E.S.;
RT "Rapid genome shrinkage in a self-fertile nematode reveals sperm
RT competition proteins.";
RL Science 359:55-61(2018).
CC -!- SUBUNIT: Collagen polypeptide chains are complexed within the cuticle
CC by disulfide bonds and other types of covalent cross-links.
CC {ECO:0000256|ARBA:ARBA00011518}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PIC26640.1}.
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DR EMBL; PDUG01000005; PIC26640.1; -; Genomic_DNA.
DR EMBL; PDUG01000005; PIC26680.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2G5THA1; -.
DR STRING; 1611254.A0A2G5THA1; -.
DR Proteomes; UP000230233; Chromosome v.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0042302; F:structural constituent of cuticle; IEA:InterPro.
DR GO; GO:0048856; P:anatomical structure development; IEA:UniProt.
DR InterPro; IPR002486; Col_cuticle_N.
DR InterPro; IPR008160; Collagen.
DR PANTHER; PTHR24637:SF302; COL_CUTICLE_N DOMAIN-CONTAINING PROTEIN-RELATED; 1.
DR PANTHER; PTHR24637; COLLAGEN; 1.
DR Pfam; PF01484; Col_cuticle_N; 1.
DR Pfam; PF01391; Collagen; 2.
DR SMART; SM01088; Col_cuticle_N; 1.
PE 4: Predicted;
KW Disulfide bond {ECO:0000256|ARBA:ARBA00023157};
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000230233};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 12..35
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 12..64
FT /note="Nematode cuticle collagen N-terminal"
FT /evidence="ECO:0000259|SMART:SM01088"
FT REGION 107..280
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 113..162
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 211..236
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 299 AA; 29150 MW; D4D2EE38BD49A64B CRC64;
MEFEQRIKAY RFVAYSAVAF SVVAVLSVCI TLPMVHNYVH HVKRTMNQEV QFCRGSAKDI
WSEVNQLKSI QHANRTARQA GYDAGVNGGS ASAGGCDACC LPGAAGPAGT PGKPGRPGKP
GAPGLPGNPG RPPQQPCDPV TPPPCQPCPQ GPPGPPGPPG PAGDAGSNGN PGSPGQDGQP
GAPGNKGPSG PNGNPGAPGA PGQPGQDAPS EPITPGAPGP QGAPGPQGPP GAPGQPGHDG
QPGAPGPKGP NGNPGQPGAD GNPGAPGQSG TPGGAGEKGI CPKYCAIDGG VFFEDGTRR
//
