ID A0A2G5UFD4_9PELO Unreviewed; 1014 AA.
AC A0A2G5UFD4;
DT 31-JAN-2018, integrated into UniProtKB/TrEMBL.
DT 31-JAN-2018, sequence version 1.
DT 13-SEP-2023, entry version 19.
DE RecName: Full=PDZ domain-containing protein {ECO:0008006|Google:ProtNLM};
GN Name=Cni-lim-8 {ECO:0000313|EMBL:PIC38153.1};
GN Synonyms=Cnig_chr_III.g10258 {ECO:0000313|EMBL:PIC38153.1};
GN ORFNames=B9Z55_010258 {ECO:0000313|EMBL:PIC38153.1};
OS Caenorhabditis nigoni.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
OC Caenorhabditis.
OX NCBI_TaxID=1611254 {ECO:0000313|EMBL:PIC38153.1, ECO:0000313|Proteomes:UP000230233};
RN [1] {ECO:0000313|Proteomes:UP000230233}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=JU1422 {ECO:0000313|Proteomes:UP000230233};
RA Yin D., Schwarz E.M., Thomas C.G., Felde R.L., Korf I.F., Cutter A.D.,
RA Schartner C.M., Ralston E.J., Meyer B.J., Haag E.S.;
RT "Rapid genome shrinkage in a self-fertile nematode reveals novel sperm
RT competition proteins.";
RL Submitted (OCT-2017) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PIC38153.1}.
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DR EMBL; PDUG01000003; PIC38153.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2G5UFD4; -.
DR Proteomes; UP000230233; Chromosome iii.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR CDD; cd08368; LIM; 1.
DR CDD; cd00136; PDZ; 1.
DR Gene3D; 2.30.42.10; -; 1.
DR Gene3D; 2.10.110.10; Cysteine Rich Protein; 1.
DR InterPro; IPR001478; PDZ.
DR InterPro; IPR041489; PDZ_6.
DR InterPro; IPR036034; PDZ_sf.
DR InterPro; IPR001781; Znf_LIM.
DR PANTHER; PTHR15551:SF3; LIM AND CALPONIN HOMOLOGY DOMAINS-CONTAINING PROTEIN 1; 1.
DR PANTHER; PTHR15551; LIM DOMAIN ONLY 7; 1.
DR Pfam; PF00412; LIM; 1.
DR Pfam; PF17820; PDZ_6; 1.
DR SMART; SM00132; LIM; 1.
DR SMART; SM00228; PDZ; 1.
DR SUPFAM; SSF50156; PDZ domain-like; 1.
DR PROSITE; PS00478; LIM_DOMAIN_1; 1.
DR PROSITE; PS50023; LIM_DOMAIN_2; 1.
DR PROSITE; PS50106; PDZ; 1.
PE 4: Predicted;
KW LIM domain {ECO:0000256|ARBA:ARBA00023038, ECO:0000256|PROSITE-
KW ProRule:PRU00125}; Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00125};
KW Reference proteome {ECO:0000313|Proteomes:UP000230233};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00125}.
FT DOMAIN 326..396
FT /note="PDZ"
FT /evidence="ECO:0000259|PROSITE:PS50106"
FT DOMAIN 944..1010
FT /note="LIM zinc-binding"
FT /evidence="ECO:0000259|PROSITE:PS50023"
FT REGION 1..20
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 53..130
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 448..561
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 582..704
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 716..737
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 856..877
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 896..936
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..19
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 58..106
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 459..489
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 496..516
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 534..561
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 593..611
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 633..648
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 688..703
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 856..871
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 912..936
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1014 AA; 115938 MW; 67F41CB4917ADD35 CRC64;
MMTSSYPTSS GTASGTLPSN FVELFDEEER KSRNKSVKWD DMLVTKEEIL EVNSASRPAL
PRQHSASTVS PLQSSSDELN NDSGIDNRTV GSPSTSEFSP RSTDLFVSPK SLIDEEPPHH
PPPPPPVEEK LDQVLIPLKL SRSQDYAPIY RSLEKDTYYD QCPSESDKDE ELTTNSRSYV
ESTRLLEKNQ YMPVTNARVE ATFKQPPPRE GVKPFVSRAA QENNDYESRT ENIDLTVELN
REQKATVTAT KYPRSDFIME DHHHRPQAQT HAPPPMKSSS TTRIYHAVDI PFDESPAAYY
PKQNNDYPRQ RRYSASSISK QDGMFTLNVV MGSQPVHKGM GFSTFKRENR VIVESVIVGS
PADKAGLLVG DTILSINGED MSDKYQSGVT RILHEAARVG EADILILRAP APAPMLTKQM
STSSSNSSNF DKARSVFTEN KSFDSYAEFK RKHSRASRDS NSSGATRSSR DFNSLPRGTT
AQSSLDRKRD TSLSSYRTAK DNFDSNRSSA RSEYGDYRVT SYQEKNAPGR LTDFVPEVDR
RLSRREQSEE IYSKNQREEE PRTIRNYHLS NENIARTNLN FDGRRGSEEE STTTTLKRST
LPRSGATQWK NEYSDGEEVV EKLPVTSRDP SPLRSALKKS SHNYYHQESD PSPRPPPPRR
FYSTESLIPN QKTSYQRYSE EEDEEVEESY TSMRRHRQQQ PRYSDEFHTV GSYGVFPQRS
RSQQPTSRLP RYDDMPDDVD FDDVSGVSHR FYDRSGNHVR APRERTYDIQ IQRDYGSRST
PRDLDFVRNT YKWEEQQEDT KVTTTTKIYE KESRDWRDVI NQQRQAAPGN SVDRRGIAAT
SASLSNLPTY INRRMEKERE REREYLRDRE YSMPPVEPPI ITEKYERDEY SRVEERTYPV
PVARNNMRRE ETQKQSQSQS QSQTSQSQSQ SQSQDAVVAV SGKHRCAHCN EELGRGAAMI
VESLNLFYHL ACFKCYVCKT SLGSGATGAD VRVRDGRLHC QTCYSNDRVQ LSKV
//
