ID A0A2G5V270_9PELO Unreviewed; 518 AA.
AC A0A2G5V270;
DT 31-JAN-2018, integrated into UniProtKB/TrEMBL.
DT 31-JAN-2018, sequence version 1.
DT 27-MAR-2024, entry version 23.
DE RecName: Full=RRM domain-containing protein {ECO:0000259|PROSITE:PS50102};
GN Name=Cni-ptb-1 {ECO:0000313|EMBL:PIC45840.1};
GN Synonyms=Cnig_chr_II.g5728 {ECO:0000313|EMBL:PIC45840.1};
GN ORFNames=B9Z55_005728 {ECO:0000313|EMBL:PIC45840.1};
OS Caenorhabditis nigoni.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
OC Caenorhabditis.
OX NCBI_TaxID=1611254 {ECO:0000313|EMBL:PIC45840.1, ECO:0000313|Proteomes:UP000230233};
RN [1] {ECO:0000313|Proteomes:UP000230233}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=JU1422 {ECO:0000313|Proteomes:UP000230233};
RA Yin D., Schwarz E.M., Thomas C.G., Felde R.L., Korf I.F., Cutter A.D.,
RA Schartner C.M., Ralston E.J., Meyer B.J., Haag E.S.;
RT "Rapid genome shrinkage in a self-fertile nematode reveals novel sperm
RT competition proteins.";
RL Submitted (OCT-2017) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PIC45840.1}.
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DR EMBL; PDUG01000002; PIC45840.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2G5V270; -.
DR STRING; 1611254.A0A2G5V270; -.
DR Proteomes; UP000230233; Chromosome ii.
DR GO; GO:0005634; C:nucleus; IEA:InterPro.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0006397; P:mRNA processing; IEA:InterPro.
DR CDD; cd12693; RRM2_PTBP1_like; 1.
DR CDD; cd12423; RRM3_PTBP1_like; 1.
DR CDD; cd12425; RRM4_PTBP1_like; 1.
DR Gene3D; 3.30.70.330; -; 3.
DR InterPro; IPR006536; HnRNP-L/PTB.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR021790; PTBP1-like_RRM2.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR000504; RRM_dom.
DR NCBIfam; TIGR01649; hnRNP-L_PTB; 1.
DR PANTHER; PTHR15592:SF27; HEPHAESTUS, ISOFORM Y; 1.
DR PANTHER; PTHR15592; MATRIN 3/NUCLEAR PROTEIN 220-RELATED; 1.
DR Pfam; PF13893; RRM_5; 1.
DR Pfam; PF11835; RRM_8; 1.
DR SMART; SM00360; RRM; 3.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 2.
DR PROSITE; PS50102; RRM; 2.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000230233};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884, ECO:0000256|PROSITE-
KW ProRule:PRU00176}.
FT DOMAIN 321..398
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT DOMAIN 441..516
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT REGION 1..27
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 518 AA; 57522 MW; CA27210D17EC2DCA CRC64;
MPTPSSSKPS IIPNPLSRKR RDDVDDMNSK YSTTKRLAFC EPQLATGASS HHVLLATTTP
LPAATATSSL QPPIKQRRMA ASQVLTSDHP YHQHDAVFRA PVNNDANRAA VKSVANGSVS
NFEVGTQQQP NSVLRTIIEN MMFPVSLEVL HQLFARYGKV LRIITFNKNN TFQALIQMSE
ANSAQLAKQG LENQNVYNGC CTLRIDYSKL STLNVKYNND KSRDYTNPNL PPGEMTLEQQ
IAISTIPGLQ NLIPTNPYNF AFGANPATTF LTNQLATATA AATDSANAAA LAPYLNPLGL
GSANLATSIP AMRFPMLNLT PVILVSNLHE MVRPFLKFLF IRNPFWVYGD VMRVKILYNK
KDNALIQYSE PQQAQLALTH LDKVKWHDRL IRVAPSKHTN VQMPKEGQPD AGLTRDYAHS
TLHRFKKPGS KNYLNIYPPC ATLHLSNIPA TVSEDKLKEM FLEAGYAVKA FKFFPKDHKM
ALCQLEDIET AIDALIKMHN QKLAENAHLR VSFSKSGI
//
