ID A0A2G5V565_9PELO Unreviewed; 974 AA.
AC A0A2G5V565;
DT 31-JAN-2018, integrated into UniProtKB/TrEMBL.
DT 31-JAN-2018, sequence version 1.
DT 24-JAN-2024, entry version 13.
DE RecName: Full=SSD domain-containing protein {ECO:0000259|PROSITE:PS50156};
GN Name=Cni-ptr-6 {ECO:0000313|EMBL:PIC46880.1};
GN Synonyms=Cnig_chr_II.g6425 {ECO:0000313|EMBL:PIC46880.1};
GN ORFNames=B9Z55_006425 {ECO:0000313|EMBL:PIC46880.1};
OS Caenorhabditis nigoni.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
OC Caenorhabditis.
OX NCBI_TaxID=1611254 {ECO:0000313|EMBL:PIC46880.1, ECO:0000313|Proteomes:UP000230233};
RN [1] {ECO:0000313|Proteomes:UP000230233}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=JU1422 {ECO:0000313|Proteomes:UP000230233};
RA Yin D., Schwarz E.M., Thomas C.G., Felde R.L., Korf I.F., Cutter A.D.,
RA Schartner C.M., Ralston E.J., Meyer B.J., Haag E.S.;
RT "Rapid genome shrinkage in a self-fertile nematode reveals novel sperm
RT competition proteins.";
RL Submitted (OCT-2017) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the patched family.
CC {ECO:0000256|ARBA:ARBA00005585}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PIC46880.1}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; PDUG01000002; PIC46880.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2G5V565; -.
DR STRING; 1611254.A0A2G5V565; -.
DR Proteomes; UP000230233; Chromosome ii.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR Gene3D; 1.20.1640.10; Multidrug efflux transporter AcrB transmembrane domain; 2.
DR InterPro; IPR003392; Ptc/Disp.
DR InterPro; IPR000731; SSD.
DR PANTHER; PTHR10796; PATCHED-RELATED; 1.
DR PANTHER; PTHR10796:SF91; SSD DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF02460; Patched; 1.
DR SUPFAM; SSF82866; Multidrug efflux transporter AcrB transmembrane domain; 2.
DR PROSITE; PS50156; SSD; 1.
PE 3: Inferred from homology;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000230233};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 27..49
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 301..322
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 342..363
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 370..395
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 415..436
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 448..473
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 577..597
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 779..803
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 809..830
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 837..860
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 880..901
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 913..939
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 302..473
FT /note="SSD"
FT /evidence="ECO:0000259|PROSITE:PS50156"
FT REGION 505..529
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 974 AA; 111974 MW; 59AC55CC6EDE42EC CRC64;
MRCRFPTLDK KLEKFFAWYT RHLLVDYYYV FLIAPIILTA ICSGGFYWIK ELTLLDARKL
YTPVSAPSWR EEEVFSELWP VKSYEFLPER TFQWNRYLYL VVHGRPFENG SYPNLLEGSY
LDDIAKIEEE VATNVSFYRE EALEDNPALM RKRHLNSTEI EVNQNTTITF KDVCMNWYGD
CYREKNVIEL LKRRHELNKR GISVTFPQVN QEGTPIYIAF VIGGVDTYPN DTIKYARAMR
LWYFLKFDDE EQEQLAKYWE DTAEKFVRET YGDHPTIQCH IKHSRIVDQG LTRNANRLKP
YFNVTIAVLV LFTAFYSVKW YFRTDHCWPL HIDWLRSKPM LALGGVLSSV LAILSGIGLL
LWFGMFFAEI TLIAPFLVLS IGVDDMFIAV AAWHNTEMKY PGRSPKVMKK RMVEAMSESA
VAIFITSFTD VLSFGVGTIT DIIAVQGFCA MTAACMFFTF LYQITFFAAL MVISAKAQMS
GRNSCMPCMT ANDIYTIEDG SLQPNLKKKS KSRKDAKEEK PSEKNMEIAE NEIAEKRSYD
SSPDPSQIHI PVKSRGAMGH FFRDYYVPWL LNWKTKLFMF LVFIVYLGTA IYGICVMEQG
LDYDKLLLHS DPLVEALKRE IDLFHGGDQI EVAIQNCPNL TIPENRDRIE MIAQEFENIS
YSLGGKGTSF WMREYKKYSN LTGSYLNDNR ESWIVGVYEW SQLFAFYKLW SQDFVWTNEA
DYDTLELKSY RFRIGVHGLS TPTDLVLITE ELRGVADRHP DLDIVTYQQS RAIADQLNVI
LSSTITNDTL AMFCMFCVAL IFIPNPICAL FITLAMVTID IGVIGFLSLW SVKLDPISMI
TIIMSIGFSI EFSAHITHGF VSNENNLSAF DRCVDAMEKL AWPVVHGSLS TILGVFVLAF
IDSYMVLVFF KTISLVLMIG AWHALMLLPI LLSICIPVIE RLSDASKKAS DRRRKQKENK
NSIYAINLPV NVSS
//
