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Database: UniProt
Entry: A0A2G5VTQ5_9PELO
LinkDB: A0A2G5VTQ5_9PELO
Original site: A0A2G5VTQ5_9PELO 
ID   A0A2G5VTQ5_9PELO        Unreviewed;       728 AA.
AC   A0A2G5VTQ5;
DT   31-JAN-2018, integrated into UniProtKB/TrEMBL.
DT   31-JAN-2018, sequence version 1.
DT   24-JAN-2024, entry version 10.
DE   RecName: Full=SSD domain-containing protein {ECO:0000259|PROSITE:PS50156};
GN   Name=Cni-ptr-11 {ECO:0000313|EMBL:PIC54926.1};
GN   Synonyms=Cnig_chr_I.g413 {ECO:0000313|EMBL:PIC54926.1};
GN   ORFNames=B9Z55_000413 {ECO:0000313|EMBL:PIC54926.1};
OS   Caenorhabditis nigoni.
OC   Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC   Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
OC   Caenorhabditis.
OX   NCBI_TaxID=1611254 {ECO:0000313|EMBL:PIC54926.1, ECO:0000313|Proteomes:UP000230233};
RN   [1] {ECO:0000313|Proteomes:UP000230233}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=JU1422 {ECO:0000313|Proteomes:UP000230233};
RA   Yin D., Schwarz E.M., Thomas C.G., Felde R.L., Korf I.F., Cutter A.D.,
RA   Schartner C.M., Ralston E.J., Meyer B.J., Haag E.S.;
RT   "Rapid genome shrinkage in a self-fertile nematode reveals novel sperm
RT   competition proteins.";
RL   Submitted (OCT-2017) to the EMBL/GenBank/DDBJ databases.
CC   -!- SIMILARITY: Belongs to the patched family.
CC       {ECO:0000256|ARBA:ARBA00005585}.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:PIC54926.1}.
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DR   EMBL; PDUG01000001; PIC54926.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A2G5VTQ5; -.
DR   Proteomes; UP000230233; Chromosome i.
DR   GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR   Gene3D; 1.20.1640.10; Multidrug efflux transporter AcrB transmembrane domain; 1.
DR   InterPro; IPR003392; Ptc/Disp.
DR   InterPro; IPR000731; SSD.
DR   PANTHER; PTHR10796; PATCHED-RELATED; 1.
DR   PANTHER; PTHR10796:SF108; SSD DOMAIN-CONTAINING PROTEIN; 1.
DR   Pfam; PF02460; Patched; 1.
DR   SUPFAM; SSF82866; Multidrug efflux transporter AcrB transmembrane domain; 1.
DR   PROSITE; PS50156; SSD; 1.
PE   3: Inferred from homology;
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Reference proteome {ECO:0000313|Proteomes:UP000230233};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM        28..48
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        249..268
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        280..304
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        311..332
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        352..373
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        380..405
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        440..460
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        651..684
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        696..717
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   DOMAIN          249..406
FT                   /note="SSD"
FT                   /evidence="ECO:0000259|PROSITE:PS50156"
SQ   SEQUENCE   728 AA;  81177 MW;  E895036368DFC2E0 CRC64;
     MVTLQPAARM GWDTISAVVA RILAAYPVYS ILLSILSILA LSAGLVNIRL EPDIRKSFSP
     EDSDAGYETR VWLEYYGLKI YPERAFCIFT AKSEDGSILQ EEALRDIYTV DTRLVQAVGL
     RDGDGRRNCD PLCDLNSPFH LLANQTRKNN GTTAVFTYPD MPYSGLDIFL GLHFSNVDFK
     PPTHRISSRS LVLWYFSRSD TPEGKLAFKD AIDELFDLSK NSSAFENVEF TIFSDQVANR
     EMIRGAIEAT TLMTIGFFLL LTQVIIVIKR LSSIKMTAYL VTTSLLTPMA ATIASFGAIC
     WMGFPSFSIQ CVTPFLVLGI GVDDAFILLH RWKHHIAISD TPRRLEQVIV DVGPSITITS
     LTNIIAFGIG FFTPTPQMSL FCLTASLALL LDYIFTYTIL APIVFLCNDP TYQSVPKDET
     ISKADTWLAK YSRFVCSLRG RIVCIFVLIG MYGLTTYGVM TMRTTFEPAK AFPSNSKLVD
     SLSNIKPVFN RYFPITVIVN NPPNISNEIE YDSFHNMMNR LEHVPGIRGD NRSLIFLPQY
     EAYDKLANSF SILLGDKYRP SYDSLPNWMD AIGNPPLVKY HLDENNKTIV TSFRLTLLGK
     GMSEWAERAR AMQHIRTVLR EEQQFNATLF DCDSAILSII LTVGTDLIGS IAVTVVCMAI
     VCFVFIANFN AVAVITSIIA SICYDHNSDP PNTMNAIYTA ILVASTLAYS AVAWIGLSMD
     PTASEDLF
//
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