ID A0A2G8KNX8_STIJA Unreviewed; 704 AA.
AC A0A2G8KNX8;
DT 31-JAN-2018, integrated into UniProtKB/TrEMBL.
DT 31-JAN-2018, sequence version 1.
DT 22-FEB-2023, entry version 15.
DE SubName: Full=Putative transcription initiation factor TFIID subunit 1 {ECO:0000313|EMBL:PIK49714.1};
GN ORFNames=BSL78_13390 {ECO:0000313|EMBL:PIK49714.1};
OS Stichopus japonicus (Sea cucumber).
OC Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Echinozoa; Holothuroidea;
OC Aspidochirotacea; Aspidochirotida; Stichopodidae; Apostichopus.
OX NCBI_TaxID=307972 {ECO:0000313|EMBL:PIK49714.1, ECO:0000313|Proteomes:UP000230750};
RN [1] {ECO:0000313|EMBL:PIK49714.1, ECO:0000313|Proteomes:UP000230750}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Shaxun {ECO:0000313|EMBL:PIK49714.1};
RC TISSUE=Muscle {ECO:0000313|EMBL:PIK49714.1};
RX PubMed=29023486;
RA Zhang X., Sun L., Yuan J., Sun Y., Gao Y., Zhang L., Li S., Dai H.,
RA Hamel J.F., Liu C., Yu Y., Liu S., Lin W., Guo K., Jin S., Xu P.,
RA Storey K.B., Huan P., Zhang T., Zhou Y., Zhang J., Lin C., Li X., Xing L.,
RA Huo D., Sun M., Wang L., Mercier A., Li F., Yang H., Xiang J.;
RT "The sea cucumber genome provides insights into morphological evolution and
RT visceral regeneration.";
RL PLoS Biol. 15:E2003790-E2003790(2017).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PIK49714.1}.
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DR EMBL; MRZV01000450; PIK49714.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2G8KNX8; -.
DR STRING; 307972.A0A2G8KNX8; -.
DR Proteomes; UP000230750; Unassembled WGS sequence.
DR GO; GO:0005669; C:transcription factor TFIID complex; IEA:InterPro.
DR GO; GO:0004402; F:histone acetyltransferase activity; IEA:InterPro.
DR GO; GO:0001091; F:RNA polymerase II general transcription initiation factor binding; IEA:InterPro.
DR GO; GO:0017025; F:TBP-class protein binding; IEA:InterPro.
DR GO; GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
DR GO; GO:0006366; P:transcription by RNA polymerase II; IEA:InterPro.
DR CDD; cd05511; Bromo_TFIID; 2.
DR Gene3D; 1.20.920.10; Bromodomain-like; 2.
DR InterPro; IPR001487; Bromodomain.
DR InterPro; IPR036427; Bromodomain-like_sf.
DR InterPro; IPR018359; Bromodomain_CS.
DR InterPro; IPR040240; TAF1.
DR InterPro; IPR041670; Znf-CCHC_6.
DR PANTHER; PTHR13900; TRANSCRIPTION INITIATION FACTOR TFIID; 1.
DR PANTHER; PTHR13900:SF0; TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 1; 1.
DR Pfam; PF00439; Bromodomain; 2.
DR Pfam; PF15288; zf-CCHC_6; 1.
DR PRINTS; PR00503; BROMODOMAIN.
DR SMART; SM00297; BROMO; 2.
DR SUPFAM; SSF47370; Bromodomain; 2.
DR PROSITE; PS00633; BROMODOMAIN_1; 2.
DR PROSITE; PS50014; BROMODOMAIN_2; 2.
PE 4: Predicted;
KW Bromodomain {ECO:0000256|PROSITE-ProRule:PRU00035};
KW Initiation factor {ECO:0000313|EMBL:PIK49714.1};
KW Protein biosynthesis {ECO:0000313|EMBL:PIK49714.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000230750}.
FT DOMAIN 408..478
FT /note="Bromo"
FT /evidence="ECO:0000259|PROSITE:PS50014"
FT DOMAIN 530..600
FT /note="Bromo"
FT /evidence="ECO:0000259|PROSITE:PS50014"
FT REGION 68..88
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 95..114
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 122..154
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 238..267
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 636..674
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 253..267
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 704 AA; 81510 MW; 26488470B9E25D27 CRC64;
MSTDQEVVRW EVIDVVRTYS TKQAKSGESD INKFARGNRF GIAEHHERYK EECQRIFELQ
NKVLASDEVL STDEESSSGG DDSDFEEMGK NIESMLTNKK TSTQLSHERE EAERKELQKM
IMGEDSKDGS KEKKNGAGTP TPGGKEDDTA SVQSFGSALT GRRLKIYRTF KDDNGKEYVR
VETVRRPEII ETYVRIRQTK DEKYIRQFAL QDDKHIEELK KERRRIQEQL RRVKRYEEKL
QKEGQKPEAA AKSPALTKKR KKEKPEKEVK MKCGACGQMG HMRTNKECPM YDKKPRENQP
SVLVAMTEEQ EEMMEQDLPA EEDDALVKTE GTKIVFAKSV LDHADTLRRR SLVLRFPKEN
IPAKKKRTND TEESLDYLKR RKQSINRRRT DPLVTLGTLL ESILSGIRKI PYTTPFHTPV
NPKQVPDYYR IVNRPMDLQT IRERIRRRQY KSRDDFKGDI ESIVRNSTLY NGAKSPLTMI
ASNMLSFCEK KMAEKNDKFA RLEKAINPLL DDNDQVAFSF ILDNIITSMK AVPDSWPFHF
PVSTKQVQDY YKIIDKPMDL ETMRKSCQQH GYHNTRDFQR HVELIVENCT QYNGKESPLT
KIAHSILDAC KKELQDNDAH LAQLEQDIAR AREHMRENEQ RAMGRPGSLK NAKNMDVDEN
AQSGFPEESQ DYEEEEIDVD GDDVSKTGTL IENKVAWVLL VSTL
//