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Database: UniProt
Entry: A0A2G8L589_STIJA
LinkDB: A0A2G8L589_STIJA
Original site: A0A2G8L589_STIJA 
ID   A0A2G8L589_STIJA        Unreviewed;       595 AA.
AC   A0A2G8L589;
DT   31-JAN-2018, integrated into UniProtKB/TrEMBL.
DT   31-JAN-2018, sequence version 1.
DT   24-JAN-2024, entry version 16.
DE   SubName: Full=Putative HMG domain-containing protein 4-like {ECO:0000313|EMBL:PIK55427.1};
GN   ORFNames=BSL78_07655 {ECO:0000313|EMBL:PIK55427.1};
OS   Stichopus japonicus (Sea cucumber).
OC   Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Echinozoa; Holothuroidea;
OC   Aspidochirotacea; Aspidochirotida; Stichopodidae; Apostichopus.
OX   NCBI_TaxID=307972 {ECO:0000313|EMBL:PIK55427.1, ECO:0000313|Proteomes:UP000230750};
RN   [1] {ECO:0000313|EMBL:PIK55427.1, ECO:0000313|Proteomes:UP000230750}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Shaxun {ECO:0000313|EMBL:PIK55427.1};
RC   TISSUE=Muscle {ECO:0000313|EMBL:PIK55427.1};
RX   PubMed=29023486;
RA   Zhang X., Sun L., Yuan J., Sun Y., Gao Y., Zhang L., Li S., Dai H.,
RA   Hamel J.F., Liu C., Yu Y., Liu S., Lin W., Guo K., Jin S., Xu P.,
RA   Storey K.B., Huan P., Zhang T., Zhou Y., Zhang J., Lin C., Li X., Xing L.,
RA   Huo D., Sun M., Wang L., Mercier A., Li F., Yang H., Xiang J.;
RT   "The sea cucumber genome provides insights into morphological evolution and
RT   visceral regeneration.";
RL   PLoS Biol. 15:E2003790-E2003790(2017).
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:PIK55427.1}.
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DR   EMBL; MRZV01000215; PIK55427.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A2G8L589; -.
DR   STRING; 307972.A0A2G8L589; -.
DR   Proteomes; UP000230750; Unassembled WGS sequence.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-UniRule.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR   Gene3D; 1.10.30.10; High mobility group box domain; 1.
DR   InterPro; IPR009071; HMG_box_dom.
DR   InterPro; IPR036910; HMG_box_dom_sf.
DR   InterPro; IPR042477; HMGXB4.
DR   PANTHER; PTHR46584; HMG DOMAIN-CONTAINING PROTEIN 4; 1.
DR   PANTHER; PTHR46584:SF1; HMG DOMAIN-CONTAINING PROTEIN 4; 1.
DR   Pfam; PF00505; HMG_box; 1.
DR   SMART; SM00398; HMG; 1.
DR   SUPFAM; SSF47095; HMG-box; 1.
DR   PROSITE; PS50118; HMG_BOX_2; 1.
PE   4: Predicted;
KW   DNA-binding {ECO:0000256|PROSITE-ProRule:PRU00267};
KW   Nucleus {ECO:0000256|PROSITE-ProRule:PRU00267};
KW   Reference proteome {ECO:0000313|Proteomes:UP000230750}.
FT   DOMAIN          419..480
FT                   /note="HMG box"
FT                   /evidence="ECO:0000259|PROSITE:PS50118"
FT   DNA_BIND        419..480
FT                   /note="HMG box"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00267"
FT   REGION          1..184
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          206..359
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          397..417
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        96..112
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        137..176
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        209..230
FT                   /note="Basic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        231..260
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        292..318
FT                   /note="Basic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        330..344
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   595 AA;  66590 MW;  E462ECAB3E6A795A CRC64;
     MSSTRRKRNV GSQIRIKQEV AEHEQPTVKR QKVGRSQASS LLLKVKKESG KVVRKKDVAP
     VTISPPGSKT DDGSLKMKFI LSPKREPEDN DDEEEDDHSA SKKSKKEISS KTNPSLKLKL
     SFKSSPDEIT KGGGGASKST DEEHVHPKKR FKTCFEESAA SDLKPTSKRG KGIKLDSDSG
     YSDAQTGMQA KVKALDTSVA EKRNIIVDKK KDKKKKRKEK DKKKKFFKNK SDKNRFLNVH
     RSSDEAEDGW IEEKMKAESQ SEYEVISPWS KPNEPLPEAS PVEVSLTPIK LKKDKKKSKN
     KSKRKRGKKS KKLLHHPEKK KKDKESFTQE QIVKIQQRLM KQGLKSPSSG GDDIGELNFS
     SHGEDLISQL TASSGHFDPS SLLDELPVES EPLLKPVTAK VTDKKTDKNS KLKDKAKKKK
     KVITAYQMWC KANRASILEQ TPGLDFASMS RKLGEKWHSL AEKEKTKWKH KQRALMLRHK
     NVPALSRMKK HVQKASNPKA RSQQYKAPPP HTDPIDVAAH LKLLGDSLTN VGRSLIKQAS
     GETEVHGSVS VLMDSMLSAI APLLCLTSQV DELSVIPRKT QSSLLENIAY IMPGL
//
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