ID A0A2G8L589_STIJA Unreviewed; 595 AA.
AC A0A2G8L589;
DT 31-JAN-2018, integrated into UniProtKB/TrEMBL.
DT 31-JAN-2018, sequence version 1.
DT 24-JAN-2024, entry version 16.
DE SubName: Full=Putative HMG domain-containing protein 4-like {ECO:0000313|EMBL:PIK55427.1};
GN ORFNames=BSL78_07655 {ECO:0000313|EMBL:PIK55427.1};
OS Stichopus japonicus (Sea cucumber).
OC Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Echinozoa; Holothuroidea;
OC Aspidochirotacea; Aspidochirotida; Stichopodidae; Apostichopus.
OX NCBI_TaxID=307972 {ECO:0000313|EMBL:PIK55427.1, ECO:0000313|Proteomes:UP000230750};
RN [1] {ECO:0000313|EMBL:PIK55427.1, ECO:0000313|Proteomes:UP000230750}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Shaxun {ECO:0000313|EMBL:PIK55427.1};
RC TISSUE=Muscle {ECO:0000313|EMBL:PIK55427.1};
RX PubMed=29023486;
RA Zhang X., Sun L., Yuan J., Sun Y., Gao Y., Zhang L., Li S., Dai H.,
RA Hamel J.F., Liu C., Yu Y., Liu S., Lin W., Guo K., Jin S., Xu P.,
RA Storey K.B., Huan P., Zhang T., Zhou Y., Zhang J., Lin C., Li X., Xing L.,
RA Huo D., Sun M., Wang L., Mercier A., Li F., Yang H., Xiang J.;
RT "The sea cucumber genome provides insights into morphological evolution and
RT visceral regeneration.";
RL PLoS Biol. 15:E2003790-E2003790(2017).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PIK55427.1}.
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DR EMBL; MRZV01000215; PIK55427.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2G8L589; -.
DR STRING; 307972.A0A2G8L589; -.
DR Proteomes; UP000230750; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-UniRule.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR Gene3D; 1.10.30.10; High mobility group box domain; 1.
DR InterPro; IPR009071; HMG_box_dom.
DR InterPro; IPR036910; HMG_box_dom_sf.
DR InterPro; IPR042477; HMGXB4.
DR PANTHER; PTHR46584; HMG DOMAIN-CONTAINING PROTEIN 4; 1.
DR PANTHER; PTHR46584:SF1; HMG DOMAIN-CONTAINING PROTEIN 4; 1.
DR Pfam; PF00505; HMG_box; 1.
DR SMART; SM00398; HMG; 1.
DR SUPFAM; SSF47095; HMG-box; 1.
DR PROSITE; PS50118; HMG_BOX_2; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|PROSITE-ProRule:PRU00267};
KW Nucleus {ECO:0000256|PROSITE-ProRule:PRU00267};
KW Reference proteome {ECO:0000313|Proteomes:UP000230750}.
FT DOMAIN 419..480
FT /note="HMG box"
FT /evidence="ECO:0000259|PROSITE:PS50118"
FT DNA_BIND 419..480
FT /note="HMG box"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00267"
FT REGION 1..184
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 206..359
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 397..417
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 96..112
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 137..176
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 209..230
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 231..260
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 292..318
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 330..344
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 595 AA; 66590 MW; E462ECAB3E6A795A CRC64;
MSSTRRKRNV GSQIRIKQEV AEHEQPTVKR QKVGRSQASS LLLKVKKESG KVVRKKDVAP
VTISPPGSKT DDGSLKMKFI LSPKREPEDN DDEEEDDHSA SKKSKKEISS KTNPSLKLKL
SFKSSPDEIT KGGGGASKST DEEHVHPKKR FKTCFEESAA SDLKPTSKRG KGIKLDSDSG
YSDAQTGMQA KVKALDTSVA EKRNIIVDKK KDKKKKRKEK DKKKKFFKNK SDKNRFLNVH
RSSDEAEDGW IEEKMKAESQ SEYEVISPWS KPNEPLPEAS PVEVSLTPIK LKKDKKKSKN
KSKRKRGKKS KKLLHHPEKK KKDKESFTQE QIVKIQQRLM KQGLKSPSSG GDDIGELNFS
SHGEDLISQL TASSGHFDPS SLLDELPVES EPLLKPVTAK VTDKKTDKNS KLKDKAKKKK
KVITAYQMWC KANRASILEQ TPGLDFASMS RKLGEKWHSL AEKEKTKWKH KQRALMLRHK
NVPALSRMKK HVQKASNPKA RSQQYKAPPP HTDPIDVAAH LKLLGDSLTN VGRSLIKQAS
GETEVHGSVS VLMDSMLSAI APLLCLTSQV DELSVIPRKT QSSLLENIAY IMPGL
//