ID A0A2G8LHQ4_STIJA Unreviewed; 231 AA.
AC A0A2G8LHQ4;
DT 31-JAN-2018, integrated into UniProtKB/TrEMBL.
DT 31-JAN-2018, sequence version 1.
DT 27-MAR-2024, entry version 10.
DE SubName: Full=Putative collagen alpha-1(X) chain {ECO:0000313|EMBL:PIK59787.1};
GN ORFNames=BSL78_03242 {ECO:0000313|EMBL:PIK59787.1};
OS Stichopus japonicus (Sea cucumber).
OC Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Echinozoa; Holothuroidea;
OC Aspidochirotacea; Aspidochirotida; Stichopodidae; Apostichopus.
OX NCBI_TaxID=307972 {ECO:0000313|EMBL:PIK59787.1, ECO:0000313|Proteomes:UP000230750};
RN [1] {ECO:0000313|EMBL:PIK59787.1, ECO:0000313|Proteomes:UP000230750}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Shaxun {ECO:0000313|EMBL:PIK59787.1};
RC TISSUE=Muscle {ECO:0000313|EMBL:PIK59787.1};
RX PubMed=29023486;
RA Zhang X., Sun L., Yuan J., Sun Y., Gao Y., Zhang L., Li S., Dai H.,
RA Hamel J.F., Liu C., Yu Y., Liu S., Lin W., Guo K., Jin S., Xu P.,
RA Storey K.B., Huan P., Zhang T., Zhou Y., Zhang J., Lin C., Li X., Xing L.,
RA Huo D., Sun M., Wang L., Mercier A., Li F., Yang H., Xiang J.;
RT "The sea cucumber genome provides insights into morphological evolution and
RT visceral regeneration.";
RL PLoS Biol. 15:E2003790-E2003790(2017).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PIK59787.1}.
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DR EMBL; MRZV01000073; PIK59787.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2G8LHQ4; -.
DR STRING; 307972.A0A2G8LHQ4; -.
DR Proteomes; UP000230750; Unassembled WGS sequence.
DR GO; GO:0005581; C:collagen trimer; IEA:UniProtKB-KW.
DR Gene3D; 2.60.120.40; -; 1.
DR InterPro; IPR001073; C1q_dom.
DR InterPro; IPR008983; Tumour_necrosis_fac-like_dom.
DR PANTHER; PTHR15427:SF48; C1Q DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR15427; EMILIN ELASTIN MICROFIBRIL INTERFACE-LOCATED PROTEIN ELASTIN MICROFIBRIL INTERFACER; 1.
DR Pfam; PF00386; C1q; 1.
DR PRINTS; PR00007; COMPLEMNTC1Q.
DR SMART; SM00110; C1Q; 1.
DR SUPFAM; SSF49842; TNF-like; 1.
DR PROSITE; PS50871; C1Q; 1.
PE 4: Predicted;
KW Collagen {ECO:0000313|EMBL:PIK59787.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000230750}.
FT DOMAIN 96..231
FT /note="C1q"
FT /evidence="ECO:0000259|PROSITE:PS50871"
FT REGION 1..67
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 231 AA; 25092 MW; E40971E5725D4CF4 CRC64;
MDPWFSRPRG MPGPPGIPGY SGMNGHNGEP GLCTCLKGPK GYSGPMEEKG TGASGENGEP
GEPGADAVCD AQLCRDSAVR SAPSDTDQSD GGTRDRKRNF SAFSVSRFGT AEALVDTEII
TWDHEFSNVG GDFSPETGIF NCSIAGFYFF TFHIYKSSSA NYPMVRLMLN GEVQVSIIDA
DYWDSEDSSS NSVILELSVG DIIWLDLYEG RVLHSSYYRY TTFSGTLLHA R
//
