ID A0A2G9FYA0_9LAMI Unreviewed; 658 AA.
AC A0A2G9FYA0;
DT 31-JAN-2018, integrated into UniProtKB/TrEMBL.
DT 31-JAN-2018, sequence version 1.
DT 27-MAR-2024, entry version 21.
DE RecName: Full=BED-type domain-containing protein {ECO:0000259|PROSITE:PS50808};
GN ORFNames=CDL12_29662 {ECO:0000313|EMBL:PIM97864.1};
OS Handroanthus impetiginosus.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance;
OC Handroanthus.
OX NCBI_TaxID=429701 {ECO:0000313|EMBL:PIM97864.1, ECO:0000313|Proteomes:UP000231279};
RN [1] {ECO:0000313|Proteomes:UP000231279}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. UFG-1 {ECO:0000313|Proteomes:UP000231279};
RX PubMed=29253216; DOI=10.1093/gigascience/gix125;
RA Silva-Junior O.B., Grattapaglia D., Novaes E., Collevatti R.G.;
RT "Genome assembly of the Pink Ipe (Handroanthus impetiginosus,
RT Bignoniaceae), a highly valued, ecologically keystone Neotropical timber
RT forest tree.";
RL Gigascience 7:1-16(2018).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PIM97864.1}.
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DR EMBL; NKXS01009026; PIM97864.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2G9FYA0; -.
DR STRING; 429701.A0A2G9FYA0; -.
DR OrthoDB; 751563at2759; -.
DR Proteomes; UP000231279; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR InterPro; IPR003656; Znf_BED.
DR PANTHER; PTHR46951; BED-TYPE DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR46951:SF3; BED-TYPE DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF02892; zf-BED; 2.
DR PROSITE; PS50808; ZF_BED; 3.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000231279};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00027}.
FT DOMAIN 216..267
FT /note="BED-type"
FT /evidence="ECO:0000259|PROSITE:PS50808"
FT DOMAIN 414..473
FT /note="BED-type"
FT /evidence="ECO:0000259|PROSITE:PS50808"
FT DOMAIN 507..566
FT /note="BED-type"
FT /evidence="ECO:0000259|PROSITE:PS50808"
FT REGION 176..218
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 622..653
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 176..205
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 658 AA; 74161 MW; 295E4B282076F304 CRC64;
MISQNAAMNN QQSDAAYDTT VSARPIAAAA WRGRFNIPSR NLDINISAHV SNIASLKVLE
VASIMPESLC LEMVPRLDVW PASFKSSPPT EHSISLFFFL DGRDEERFES LLTDAMYTDV
ALKATIGKAK LLIFTSLQLP QKLHAFQGKL YFWGVFTGQE AVSSRQSDCR VDIQTTGTEQ
SNSGNHRTFD GKGNPVTTSS KHNPSTRAAK ADRRGRRLDN AWEHAKPLDE LRQKAECRYC
GFVSSHGGIS RLKAHLGGGH PSIRLPDCHK VPPEVKKVMA DWFSEWSKCT KALWTKEIRD
ADKRRRPDDL AWEHAKPSDV ADPKTQCKYF SFVSLHGETS QHKVHIDGRD PKMPMEAWPK
VSPEIGHMSG RVKVLTPSMS HEMKGTMSEW VKNLTASRVK KSQAAGMQAE KRGRPLDNAW
EHAKPLDEAR QKTQCNYCGF VSQYGGISRL KAHLGGGCPQ MQLQGCPQVP LEVKRVMEQW
YSEWAKTSTA AWTRKSYGSA KPLKRGRPLD DTWEHAIPLD EMRQATRCKY CGFISKHGGI
ARLKLHLLGG DPTMQLQGCP NVSPDIKNLM ARETKKCRKK SKGMPMEIAG GMFQDINRTA
NEMQWFEKRH HVLQETLDEI RNTSLKERIQ QLLDEKNAKV QKMQFEIQSL KSQLASMP
//
