ID A0A2G9GB84_9LAMI Unreviewed; 1043 AA.
AC A0A2G9GB84;
DT 31-JAN-2018, integrated into UniProtKB/TrEMBL.
DT 31-JAN-2018, sequence version 1.
DT 27-MAR-2024, entry version 23.
DE SubName: Full=Helicase-like transcription factor HLTF/DNA helicase RAD5, DEAD-box superfamily {ECO:0000313|EMBL:PIN02547.1};
DE EC=3.6.4.12 {ECO:0000313|EMBL:PIN02547.1};
GN ORFNames=CDL12_24937 {ECO:0000313|EMBL:PIN02547.1};
OS Handroanthus impetiginosus.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance;
OC Handroanthus.
OX NCBI_TaxID=429701 {ECO:0000313|EMBL:PIN02547.1, ECO:0000313|Proteomes:UP000231279};
RN [1] {ECO:0000313|Proteomes:UP000231279}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. UFG-1 {ECO:0000313|Proteomes:UP000231279};
RX PubMed=29253216; DOI=10.1093/gigascience/gix125;
RA Silva-Junior O.B., Grattapaglia D., Novaes E., Collevatti R.G.;
RT "Genome assembly of the Pink Ipe (Handroanthus impetiginosus,
RT Bignoniaceae), a highly valued, ecologically keystone Neotropical timber
RT forest tree.";
RL Gigascience 7:1-16(2018).
CC -!- SIMILARITY: Belongs to the SNF2/RAD54 helicase family. RAD16 subfamily.
CC {ECO:0000256|ARBA:ARBA00008438}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PIN02547.1}.
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DR EMBL; NKXS01005872; PIN02547.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2G9GB84; -.
DR STRING; 429701.A0A2G9GB84; -.
DR OrthoDB; 11932at2759; -.
DR Proteomes; UP000231279; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR GO; GO:0140658; F:ATP-dependent chromatin remodeler activity; IEA:InterPro.
DR GO; GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
DR GO; GO:0016818; F:hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides; IEA:InterPro.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR CDD; cd18008; DEXDc_SHPRH-like; 1.
DR CDD; cd18793; SF2_C_SNF; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR Gene3D; 3.40.50.10810; Tandem AAA-ATPase domain; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR014905; HIRAN.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR038718; SNF2-like_sf.
DR InterPro; IPR049730; SNF2/RAD54-like_C.
DR InterPro; IPR000330; SNF2_N.
DR InterPro; IPR009060; UBA-like_sf.
DR InterPro; IPR001841; Znf_RING.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR InterPro; IPR017907; Znf_RING_CS.
DR PANTHER; PTHR45626:SF45; DNA REPAIR PROTEIN RAD5A; 1.
DR PANTHER; PTHR45626; TRANSCRIPTION TERMINATION FACTOR 2-RELATED; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR Pfam; PF08797; HIRAN; 1.
DR Pfam; PF00176; SNF2-rel_dom; 1.
DR Pfam; PF13920; zf-C3HC4_3; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM00490; HELICc; 1.
DR SMART; SM00910; HIRAN; 1.
DR SMART; SM00184; RING; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
DR SUPFAM; SSF57850; RING/U-box; 1.
DR SUPFAM; SSF46934; UBA-like; 1.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
DR PROSITE; PS00518; ZF_RING_1; 1.
DR PROSITE; PS50089; ZF_RING_2; 1.
PE 3: Inferred from homology;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Helicase {ECO:0000313|EMBL:PIN02547.1};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801, ECO:0000313|EMBL:PIN02547.1};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000231279};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00175}.
FT DOMAIN 419..636
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
FT DOMAIN 808..848
FT /note="RING-type"
FT /evidence="ECO:0000259|PROSITE:PS50089"
FT DOMAIN 881..1043
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
FT REGION 51..117
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 456..481
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 60..111
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 456..475
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1043 AA; 115546 MW; DC7F0360E6C20492 CRC64;
MGNKATEESI STVRSIVGAE FSDMDIIRAL HMANNDPTAA INIIFDTPRS FKKSDIPKKS
EPSNSSSNVE HPSNASSVKG NIRVENSDFG LKSNGNLNNT TGRNNGEGDG SSDNGMAKEM
GSEWWLVGNG EVAGLSTCKG RILRPGDEVN FTFPVEKKLP TPSPGKLAGG RTRQLATCSE
IVRFSTNACG EIGRIPNEWA RCLLPLVRDK KVCLQGYCKS APPVLGVMDT IVLTISVYIN
SSMFRKHHHT ALKVSSNSAD ESIVHPLPTL FKLLGLVPFK KAEFTPGDLY TRKRPLSAEE
SSGLPSSFLH INKLKVTSSA DGNNVENEES ISDNDLDNIV GVTDGSELEE MEPPSTLLCE
LRPYQKQALN WMIHLERGNS VDEAAATLHP CWDAYRLEDE RGLVIYLNAF SGDATTEFPS
MLQMARGGIL ADSMGLGKTI MTISLLLTHS ERGGSLHSAS TSQSSDDNCE ASCSSDKSPI
PPKKASKFAG FEKLMKQKAS LVGGGNLIVC PMTLIGQWKA EIETHSQPGA LSLYVHYGQS
RSKDAKVLAQ SNVVLTTYGV LASEFSTESP DDNGGLFSVR WFRVILDEAH TIKSSKSQIS
MAAAALAADC RWCLTGTPIQ NNLEDVYSLL RFLKIEPWGS WAWWNKLVQK PFEEGDERGL
KLVQSLLKPI MLRRTKSSTD REGRPILVLP PADIQVIYCN LTEAENDFYE ALFKKSKVKF
DQFVEQGRVL HNYASILELL LRLRQCCDHP FLVMSRGDTQ DYSDLNKLAR RFLKGGQVNS
DGQIKDAPSR AYIQEVVDEL RKGEQGECPI CLEAFEDAVL TPCAHRLCRE CLLASWRSST
WGLCPVCRKT ISKQELITAP TDSRFQVDVE QNWVESSKVS ALMHELGYLQ SVGSKSIVFS
QWTAFLDLLQ IPLSRSNILF LRLDGTLNQQ QRERVIKQFS EDDDIKVLLM SLKAGGVGIN
LTAASNAFVM DPWWNPAVEE QAVMRIHRIG QTKRVIIKRF IVKGTVEERM EAVQARKQRM
ISGALTDQEV RTARIEELKM LFT
//
