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Database: UniProt
Entry: A0A2G9GCL6_9LAMI
LinkDB: A0A2G9GCL6_9LAMI
Original site: A0A2G9GCL6_9LAMI 
ID   A0A2G9GCL6_9LAMI        Unreviewed;       623 AA.
AC   A0A2G9GCL6;
DT   31-JAN-2018, integrated into UniProtKB/TrEMBL.
DT   31-JAN-2018, sequence version 1.
DT   27-MAR-2024, entry version 17.
DE   SubName: Full=Transcription initiation factor TFIID, subunit BDF1 {ECO:0000313|EMBL:PIN03031.1};
GN   ORFNames=CDL12_24447 {ECO:0000313|EMBL:PIN03031.1};
OS   Handroanthus impetiginosus.
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance;
OC   Handroanthus.
OX   NCBI_TaxID=429701 {ECO:0000313|EMBL:PIN03031.1, ECO:0000313|Proteomes:UP000231279};
RN   [1] {ECO:0000313|Proteomes:UP000231279}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. UFG-1 {ECO:0000313|Proteomes:UP000231279};
RX   PubMed=29253216; DOI=10.1093/gigascience/gix125;
RA   Silva-Junior O.B., Grattapaglia D., Novaes E., Collevatti R.G.;
RT   "Genome assembly of the Pink Ipe (Handroanthus impetiginosus,
RT   Bignoniaceae), a highly valued, ecologically keystone Neotropical timber
RT   forest tree.";
RL   Gigascience 7:1-16(2018).
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:PIN03031.1}.
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DR   EMBL; NKXS01005670; PIN03031.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A2G9GCL6; -.
DR   STRING; 429701.A0A2G9GCL6; -.
DR   OrthoDB; 152619at2759; -.
DR   Proteomes; UP000231279; Unassembled WGS sequence.
DR   GO; GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
DR   Gene3D; 1.20.1270.220; -; 1.
DR   Gene3D; 1.20.920.10; Bromodomain-like; 1.
DR   InterPro; IPR001487; Bromodomain.
DR   InterPro; IPR036427; Bromodomain-like_sf.
DR   InterPro; IPR027353; NET_dom.
DR   InterPro; IPR038336; NET_sf.
DR   PANTHER; PTHR45926:SF6; HOMEOTIC PROTEIN FEMALE STERILE-RELATED; 1.
DR   PANTHER; PTHR45926; OSJNBA0053K19.4 PROTEIN; 1.
DR   Pfam; PF17035; BET; 1.
DR   Pfam; PF00439; Bromodomain; 1.
DR   PRINTS; PR00503; BROMODOMAIN.
DR   SMART; SM00297; BROMO; 1.
DR   SUPFAM; SSF47370; Bromodomain; 1.
DR   PROSITE; PS50014; BROMODOMAIN_2; 1.
DR   PROSITE; PS51525; NET; 1.
PE   4: Predicted;
KW   Bromodomain {ECO:0000256|PROSITE-ProRule:PRU00035};
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   Initiation factor {ECO:0000313|EMBL:PIN03031.1};
KW   Protein biosynthesis {ECO:0000313|EMBL:PIN03031.1};
KW   Reference proteome {ECO:0000313|Proteomes:UP000231279}.
FT   DOMAIN          192..264
FT                   /note="Bromo"
FT                   /evidence="ECO:0000259|PROSITE:PS50014"
FT   DOMAIN          414..495
FT                   /note="NET"
FT                   /evidence="ECO:0000259|PROSITE:PS51525"
FT   REGION          16..40
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          350..404
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          508..623
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COILED          102..129
FT                   /evidence="ECO:0000256|SAM:Coils"
FT   COMPBIAS        356..371
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        523..540
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        585..623
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   623 AA;  68249 MW;  6C8033DAD8844ACA CRC64;
     MASAVLASQN ESSWAHMGKI PYSNPHLNAN PNPNPKKKQK QFHHAAANGV AGRYHQHNNN
     VDSPVITQTA SDDAYSFNQT STNRNGANYG GYLTLNVASY TKSELHELRK RLSAELDQIR
     NLRDRIESGQ FNIVENPRSQ GKSKKFPGNK RPVAAVAPVP TKLPIGYDNG GSDAVNFEGL
     LMECGKIVAK LIKHKYGYIF KTPVDAAALG LHDYHLIVKR PMDLGTVKAN LAKNLYRTPV
     DFAADIRLTF NNALLYNPKT DPVNGMAEQM LARFEDLFRP IQEKIDTVVE RPEREFQAFR
     VNDELPYQGD EELQGSSWNN RNNQVIASPT RVKKAKPKAN PVPVAQVLKK PDRMQTPMQA
     HSSASTPSNP PPHLMNQQPV MPEQSVPSPV RAPAVPAKEQ KGGRVVGTVK QPKPRAKDPN
     KREMSMEEKQ KLGLGLQSLP QEKMPQLVQI IRKRNEHLAQ DGDEIELDIE ALDTETLWEL
     DRFVTNWKKF VSKTKRQALL MNINPAAGAA APTSPIAEAD TSALSDKNDE LGRKLKENDD
     EDVDIDDDMP ATSFPPVEIE KDEGTGGGVG GGQDQEHDHD DRGNASSSSS SSGSSSSDSS
     SSSDSDSGSS SGSDDSDADD AQS
//
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