ID A0A2G9GNL6_9LAMI Unreviewed; 789 AA.
AC A0A2G9GNL6;
DT 31-JAN-2018, integrated into UniProtKB/TrEMBL.
DT 31-JAN-2018, sequence version 1.
DT 27-MAR-2024, entry version 21.
DE RecName: Full=Pentacotripeptide-repeat region of PRORP domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=CDL12_20567 {ECO:0000313|EMBL:PIN06879.1};
OS Handroanthus impetiginosus.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance;
OC Handroanthus.
OX NCBI_TaxID=429701 {ECO:0000313|EMBL:PIN06879.1, ECO:0000313|Proteomes:UP000231279};
RN [1] {ECO:0000313|Proteomes:UP000231279}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. UFG-1 {ECO:0000313|Proteomes:UP000231279};
RX PubMed=29253216; DOI=10.1093/gigascience/gix125;
RA Silva-Junior O.B., Grattapaglia D., Novaes E., Collevatti R.G.;
RT "Genome assembly of the Pink Ipe (Handroanthus impetiginosus,
RT Bignoniaceae), a highly valued, ecologically keystone Neotropical timber
RT forest tree.";
RL Gigascience 7:1-16(2018).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PIN06879.1}.
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DR EMBL; NKXS01004294; PIN06879.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2G9GNL6; -.
DR STRING; 429701.A0A2G9GNL6; -.
DR OrthoDB; 446393at2759; -.
DR Proteomes; UP000231279; Unassembled WGS sequence.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0009451; P:RNA modification; IEA:InterPro.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 6.
DR InterPro; IPR046848; E_motif.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR045215; PPR_prot_At1g15510.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 6.
DR PANTHER; PTHR24015; OS07G0578800 PROTEIN-RELATED; 1.
DR PANTHER; PTHR24015:SF878; OS09G0413300 PROTEIN; 1.
DR Pfam; PF20431; E_motif; 1.
DR Pfam; PF01535; PPR; 6.
DR Pfam; PF13041; PPR_2; 4.
DR SUPFAM; SSF48452; TPR-like; 1.
DR PROSITE; PS51375; PPR; 6.
DR PROSITE; PS51257; PROKAR_LIPOPROTEIN; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000231279};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 15..49
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 208..242
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 310..344
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 408..442
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 509..543
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 610..644
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ SEQUENCE 789 AA; 86933 MW; 5C6A75924470CC2A CRC64;
MDDAFKLFEE ITNRNLVMWN LMILGCNKNS LFDDSWKVFC QMHNAGVLAD EFTYSSVLSA
CGALERVTRG EKVYGLAVKS GFFSNGYVRA GMIDLFTKCC RVEDALRVLY DFHLSGSVKN
KDIWVALEIF RQICRHGALI PNAFTFSSAL TACAAVEELD LGKSIHGCAI KLGAGADVFV
GTAIVDLYAK SGAMCDAIKQ FNLMPMRNVV SWTAIIAGFV QKRDSASAFR VFKDMQNAGE
DINSFTVSSV LAACANAAMS NEVLQIHCWT FKNGLYLDLV VKAPLITAYS KVGAINLSEM
AFTETQDLKQ VGIWANMISA FIQSENYEKA IVLFRRMLEE GIRPDKFSAL SILSIIDSLT
LGRQVHSYTL KVGTASELSV GGSIFTMYSK CGNLEDSLKA FEQLERKDNV SWTSMIAGFV
EHGCADKAVQ LFRQIRFEES FPDEKLLVAV LNACSALQSL KLGREIHGFT LRCGFGKETI
INEALVNMYS KCGDLNSARI VFHTMPLKGH VSWSSLISGF VQGGHIDEAL QLFHDMLLSE
ITVDAFTISS VLAALAVSSK TNIGTQLHAY IIKIGLESLT PIGSSLIMMY SKCGSIGDCD
KVFRQIIDPD LVSWTTMIMS YAYHGKGLEA LQLFDLMKKS GIQPDAVTFV GVLSACSHAG
LVEEGYSHLN SMIKDYKIEP SYKHYACMVD ILGRAGRLEE AERFIVNMPI EPDSLVWETL
LAACKVHSNH ELGKIAAEKI MELQPSDAGA YVSVSNICAE VGEWEHVMKV RCSVKETGVR
KKEPGWSFV
//
