ID A0A2G9GXM6_9LAMI Unreviewed; 468 AA.
AC A0A2G9GXM6;
DT 31-JAN-2018, integrated into UniProtKB/TrEMBL.
DT 31-JAN-2018, sequence version 1.
DT 27-MAR-2024, entry version 16.
DE SubName: Full=RNA helicase {ECO:0000313|EMBL:PIN10046.1};
DE EC=3.6.4.13 {ECO:0000313|EMBL:PIN10046.1};
GN ORFNames=CDL12_17371 {ECO:0000313|EMBL:PIN10046.1};
OS Handroanthus impetiginosus.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance;
OC Handroanthus.
OX NCBI_TaxID=429701 {ECO:0000313|EMBL:PIN10046.1, ECO:0000313|Proteomes:UP000231279};
RN [1] {ECO:0000313|Proteomes:UP000231279}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. UFG-1 {ECO:0000313|Proteomes:UP000231279};
RX PubMed=29253216; DOI=10.1093/gigascience/gix125;
RA Silva-Junior O.B., Grattapaglia D., Novaes E., Collevatti R.G.;
RT "Genome assembly of the Pink Ipe (Handroanthus impetiginosus,
RT Bignoniaceae), a highly valued, ecologically keystone Neotropical timber
RT forest tree.";
RL Gigascience 7:1-16(2018).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PIN10046.1}.
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DR EMBL; NKXS01003341; PIN10046.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2G9GXM6; -.
DR STRING; 429701.A0A2G9GXM6; -.
DR OrthoDB; 5487766at2759; -.
DR Proteomes; UP000231279; Unassembled WGS sequence.
DR GO; GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0003724; F:RNA helicase activity; IEA:UniProtKB-EC.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR Gene3D; 3.30.60.220; -; 1.
DR InterPro; IPR001878; Znf_CCHC.
DR InterPro; IPR007529; Znf_HIT.
DR PANTHER; PTHR48365; CCHC-TYPE DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR48365:SF1; CCHC-TYPE DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF04438; zf-HIT; 1.
DR SMART; SM00343; ZnF_C2HC; 1.
DR PROSITE; PS50158; ZF_CCHC; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000313|EMBL:PIN10046.1};
KW Helicase {ECO:0000313|EMBL:PIN10046.1};
KW Hydrolase {ECO:0000313|EMBL:PIN10046.1};
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00047};
KW Nucleotide-binding {ECO:0000313|EMBL:PIN10046.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000231279};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00047};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00047}.
FT DOMAIN 255..268
FT /note="CCHC-type"
FT /evidence="ECO:0000259|PROSITE:PS50158"
FT REGION 36..74
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 113..139
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 45..69
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 116..131
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 468 AA; 53314 MW; 518247C5EC92847E CRC64;
MGTRTNFYKN PSYAYNKQFN LNSVLQNLKS YNIAVGNASP EEPAPFVQRK RRSESKPPPD
KRNKVKENDG PMSHQGYIEK LRKEADSSQP YEELTADVLE SSSSALNLVG YESDRSTSAE
CEEDHGQLRN SEEKLNSGNG MQYFPVSASL EEADRIKTQS EQRYPAAGEP VCVVCGKYGE
YICNETNDDI CSMECKAELL QTIKVQQEPK SGQVLVRPFP GRGCTLEVPE SGGDTWDYDR
YRWSKKISGL CTYECWKCQK PGHLAEDCLV LTSHCESNRP GEAYNHVFFH DINHVAMVQN
KSNTISRDLL ELYKRCHQIG KNYSAAKCNS CRGSTTLATC LSCDNTFCDC AGHLSKHIRG
HPTHQQYFSY KLKRLVKCHK STCMVTDIKD LLACHYCFNK AFDKFYDMYT ATWKPAGLSI
IWNSICCEDH FEWHRMNCLS SDVEDSAYIF KNKRGKDEKS VQLSDFIF
//
