ID A0A2G9GZX4_9LAMI Unreviewed; 943 AA.
AC A0A2G9GZX4;
DT 31-JAN-2018, integrated into UniProtKB/TrEMBL.
DT 31-JAN-2018, sequence version 1.
DT 27-MAR-2024, entry version 22.
DE SubName: Full=Helicase of the DEAD superfamily {ECO:0000313|EMBL:PIN10824.1};
DE EC=3.6.4.12 {ECO:0000313|EMBL:PIN10824.1};
GN ORFNames=CDL12_16595 {ECO:0000313|EMBL:PIN10824.1};
OS Handroanthus impetiginosus.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance;
OC Handroanthus.
OX NCBI_TaxID=429701 {ECO:0000313|EMBL:PIN10824.1, ECO:0000313|Proteomes:UP000231279};
RN [1] {ECO:0000313|Proteomes:UP000231279}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. UFG-1 {ECO:0000313|Proteomes:UP000231279};
RX PubMed=29253216; DOI=10.1093/gigascience/gix125;
RA Silva-Junior O.B., Grattapaglia D., Novaes E., Collevatti R.G.;
RT "Genome assembly of the Pink Ipe (Handroanthus impetiginosus,
RT Bignoniaceae), a highly valued, ecologically keystone Neotropical timber
RT forest tree.";
RL Gigascience 7:1-16(2018).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PIN10824.1}.
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DR EMBL; NKXS01003114; PIN10824.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2G9GZX4; -.
DR STRING; 429701.A0A2G9GZX4; -.
DR OrthoDB; 124793at2759; -.
DR Proteomes; UP000231279; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW.
DR GO; GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003678; F:DNA helicase activity; IEA:InterPro.
DR GO; GO:0016818; F:hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides; IEA:InterPro.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
DR CDD; cd13932; HN_RTEL1; 1.
DR CDD; cd18788; SF2_C_XPD; 1.
DR Gene3D; 1.10.275.40; -; 1.
DR Gene3D; 1.20.1160.20; -; 1.
DR Gene3D; 1.10.30.20; Bacterial XPD DNA helicase, FeS cluster domain; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR InterPro; IPR006555; ATP-dep_Helicase_C.
DR InterPro; IPR045028; DinG/Rad3-like.
DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3.
DR InterPro; IPR006554; Helicase-like_DEXD_c2.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR010614; RAD3-like_helicase_DEAD.
DR InterPro; IPR013020; Rad3/Chl1-like.
DR InterPro; IPR042493; XPD_DNA_FeS.
DR NCBIfam; TIGR00604; rad3; 1.
DR PANTHER; PTHR11472; DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBER; 1.
DR PANTHER; PTHR11472:SF34; REGULATOR OF TELOMERE ELONGATION HELICASE 1; 1.
DR Pfam; PF06733; DEAD_2; 1.
DR Pfam; PF13307; Helicase_C_2; 1.
DR SMART; SM00488; DEXDc2; 1.
DR SMART; SM00491; HELICc2; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1.
PE 4: Predicted;
KW 4Fe-4S {ECO:0000256|ARBA:ARBA00022485};
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW DNA damage {ECO:0000256|ARBA:ARBA00022763};
KW DNA repair {ECO:0000256|ARBA:ARBA00023204};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Helicase {ECO:0000256|ARBA:ARBA00022806, ECO:0000313|EMBL:PIN10824.1};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801, ECO:0000313|EMBL:PIN10824.1};
KW Iron {ECO:0000256|ARBA:ARBA00023004};
KW Iron-sulfur {ECO:0000256|ARBA:ARBA00023014};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000231279}.
FT DOMAIN 1..217
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51193"
SQ SEQUENCE 943 AA; 106081 MW; 86BE67B0CA058101 CRC64;
MRGSQYSDEE LSQSQSSKFP QIIYTSRTHS QIKQVIQELK RTNYRPKMAV LGSREQLCIH
EQVSILRGKA QTNACQALCK KRTKRYCTHF SRVTEFVKKN PGIGDDPIDI EDLVNIGRSS
GPCPYYLSRE LHKDVDILFG PYNYLIDRGN RKSLKIDWNN SILIFDEAHN LEGLCADAAS
LDLPSGLLTA CISEATKCVD LSISRRETSS DKSCNPDNFA ILRALLLKLE KRIAEVPIES
KELGFTKAGP YIYELLAELN ITQKTANMLI DIIERASALL EEDANLSESG GSRKPNGSTV
CRLESMGDIL RLIFRDNSNA HAQYYRLHVQ EVEASATDGF RGKSSRTLSW WCFNPGIAME
EFSRLGVGSI ILTSGTLSPM DSFAEELKLQ FPIRLENPHV ISGNQIWAGV APVGPSGYSF
NSSYRSRGSL EYKVELGNAI VNFARIVPDG LLVFFPSYYL LEQCINCWKT TDQQNLTIST
TIWERICKHK LPVVEPRQSS LFPLAIEDYM TKLKETSSSG AIFFAVCRGK VSEGLDFADR
AGRAVVVTGL PFATMTDPKV RLKREYLDQQ AQYQNIENKG LTGEEWYAQQ ASRAVNQAVG
RVIRHQHDYG AIIFCDERFA HSNRQSQISS WIQPHIKCYS KFGDVVYTLT RFFRDGGTRG
PLKVGLPQEN VRVPQSSEKS DKFHLEKLLI PQATPIDPTC SVDSVSFTKQ GKQDNISSHM
REIVPANRSS LTSDKIFQRS ILKCSSDLTL TEKEDLINGK KSMQELPGEA GDLVPQYTLK
KRKLLITGPD QSKHNEKFDH HSSNIVKKEN SQNVSMQSPQ EKGEVLVKNE IITQKKTVAQ
NFQEQQGVLL QTVPCNTEES KGSAFLIQVR EKLTDAEYKE FVGYMKALKS KAMKISHVLQ
SIAKLFSFPD RLSLLHGFKD FIPAKYHSLY EHYLCPNSDA AGV
//
