ID A0A2G9HV59_9LAMI Unreviewed; 999 AA.
AC A0A2G9HV59;
DT 31-JAN-2018, integrated into UniProtKB/TrEMBL.
DT 31-JAN-2018, sequence version 1.
DT 27-MAR-2024, entry version 21.
DE RecName: Full=RING-type E3 ubiquitin transferase {ECO:0000256|ARBA:ARBA00012483};
DE EC=2.3.2.27 {ECO:0000256|ARBA:ARBA00012483};
GN ORFNames=CDL12_05880 {ECO:0000313|EMBL:PIN21407.1};
OS Handroanthus impetiginosus.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance;
OC Handroanthus.
OX NCBI_TaxID=429701 {ECO:0000313|EMBL:PIN21407.1, ECO:0000313|Proteomes:UP000231279};
RN [1] {ECO:0000313|Proteomes:UP000231279}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. UFG-1 {ECO:0000313|Proteomes:UP000231279};
RX PubMed=29253216; DOI=10.1093/gigascience/gix125;
RA Silva-Junior O.B., Grattapaglia D., Novaes E., Collevatti R.G.;
RT "Genome assembly of the Pink Ipe (Handroanthus impetiginosus,
RT Bignoniaceae), a highly valued, ecologically keystone Neotropical timber
RT forest tree.";
RL Gigascience 7:1-16(2018).
CC -!- CATALYTIC ACTIVITY:
CC Reaction=S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine +
CC [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-
CC cysteine + N(6)-ubiquitinyl-[acceptor protein]-L-lysine.;
CC EC=2.3.2.27; Evidence={ECO:0000256|ARBA:ARBA00000900};
CC -!- PATHWAY: Protein modification; protein ubiquitination.
CC {ECO:0000256|ARBA:ARBA00004906}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PIN21407.1}.
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DR EMBL; NKXS01000945; PIN21407.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2G9HV59; -.
DR STRING; 429701.A0A2G9HV59; -.
DR OrthoDB; 467211at2759; -.
DR UniPathway; UPA00143; -.
DR Proteomes; UP000231279; Unassembled WGS sequence.
DR GO; GO:0004842; F:ubiquitin-protein transferase activity; IEA:InterPro.
DR GO; GO:0016567; P:protein ubiquitination; IEA:UniProtKB-UniPathway.
DR CDD; cd16664; RING-Ubox_PUB; 1.
DR Gene3D; 1.25.10.10; Leucine-rich Repeat Variant; 3.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR011989; ARM-like.
DR InterPro; IPR016024; ARM-type_fold.
DR InterPro; IPR000225; Armadillo.
DR InterPro; IPR045210; RING-Ubox_PUB.
DR InterPro; IPR003613; Ubox_domain.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR45958; RING-TYPE E3 UBIQUITIN TRANSFERASE; 1.
DR PANTHER; PTHR45958:SF8; U-BOX DOMAIN-CONTAINING PROTEIN 44-LIKE; 1.
DR Pfam; PF00514; Arm; 1.
DR Pfam; PF04564; U-box; 1.
DR SMART; SM00185; ARM; 5.
DR SMART; SM00504; Ubox; 1.
DR SUPFAM; SSF48371; ARM repeat; 3.
DR SUPFAM; SSF57850; RING/U-box; 1.
DR PROSITE; PS51698; U_BOX; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Reference proteome {ECO:0000313|Proteomes:UP000231279};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT DOMAIN 247..321
FT /note="U-box"
FT /evidence="ECO:0000259|PROSITE:PS51698"
FT COILED 59..86
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 999 AA; 111852 MW; AA3F1BDC159CE701 CRC64;
MENHMASESL LDTSNSISEV VDIARDVPIQ TDNFKKFSSF LDRIASFVQE LSKFEVKNFE
IINKALENLK VEIEFAKQLV LDCKNRNKIY LFVSCKRIVE DLDNCTKNIS RVLSIFASGS
LDVPAERNEW LMNLCKNMPD VKYHVSEVEE EILQKIETGL VDRNNDRSFA SDLLVRIAES
VGIELSERKT EFENFKDEME RIESRTDASR MEQIVLLLSN ADILTTPKEK EMKYFTKRNS
LGRKLLEPLP SFYCPITADV MVDPVETSSG HTFERAAIEK WLSDGNNLCP LTKTPLSRSS
LRPNKTLGQS IEEWKNRNTM ISITSMKPEI QSSDEEEVLC SIEKLRGLCE RSELHREWIV
MEEYIPIITG LLSAKKREVR VHSLAILYSL AKDSEDNKER IAKVNDSSIT YIVRSLARRV
DESMLSLQLL LELSRSNGVR EMIGRAQGCI LLLVTLASSD DAEASEYARE VLDNLAAIDE
NVIQMARAKF FKPLLQRLCE GPVDVQTIMA ETLADIELTD HNKLCLSSEG ALKPLLQMLH
NSDIEVKGVA VKAIEHLLGV APNGLQLIKE GAKDPLFELL FCHTLSSRKL REHAAKSIMH
LAVSTTSPEA SEGQISLLET QEDIFKLFSL ISYVAVDMQE ILLLAFHAMC KSPSGLNIRS
YLRQISAVKV LIQLCELDEL VVRANAVKLF YYLTEDGDHA TFSEHVNKKC ITCLLKIIKT
SDNEDETAAA FGIISHLPQN PQISENLLEC GTLEVIFDCL TSRNVHSSQE NTIVESASKA
LCRFTLPSHI EIQKRVAEAG MIPILVKLLE SGSPLTKRNA AISLKQFSES SRELSVPVRR
SHILGCCMRS PEPKCPVHSG ICTIESSFCL LEAKAVRPLV VVLEEPDDEA CKASLDAILT
LIDGLQLQSG CKILEEAGAV PPIIKFLNSS CVDLQEKALR ALQRIFRMIE YKTKHGKSAQ
TLLVDITQRG SRDTKSLAAK ILAQLNVLNE QSSFFSGAV
//