ID A0A2G9HZN3_9LAMI Unreviewed; 861 AA.
AC A0A2G9HZN3;
DT 31-JAN-2018, integrated into UniProtKB/TrEMBL.
DT 31-JAN-2018, sequence version 1.
DT 24-JAN-2024, entry version 23.
DE RecName: Full=C3H1-type domain-containing protein {ECO:0000259|PROSITE:PS50103};
GN ORFNames=CDL12_04323 {ECO:0000313|EMBL:PIN22971.1};
OS Handroanthus impetiginosus.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance;
OC Handroanthus.
OX NCBI_TaxID=429701 {ECO:0000313|EMBL:PIN22971.1, ECO:0000313|Proteomes:UP000231279};
RN [1] {ECO:0000313|Proteomes:UP000231279}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. UFG-1 {ECO:0000313|Proteomes:UP000231279};
RX PubMed=29253216; DOI=10.1093/gigascience/gix125;
RA Silva-Junior O.B., Grattapaglia D., Novaes E., Collevatti R.G.;
RT "Genome assembly of the Pink Ipe (Handroanthus impetiginosus,
RT Bignoniaceae), a highly valued, ecologically keystone Neotropical timber
RT forest tree.";
RL Gigascience 7:1-16(2018).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PIN22971.1}.
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DR EMBL; NKXS01000655; PIN22971.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2G9HZN3; -.
DR STRING; 429701.A0A2G9HZN3; -.
DR OrthoDB; 1077632at2759; -.
DR Proteomes; UP000231279; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0045892; P:negative regulation of DNA-templated transcription; IEA:InterPro.
DR Gene3D; 2.30.30.1190; -; 1.
DR Gene3D; 4.10.1000.10; Zinc finger, CCCH-type; 1.
DR InterPro; IPR045124; Su(sable)-like.
DR InterPro; IPR041367; Znf-CCCH_4.
DR InterPro; IPR000571; Znf_CCCH.
DR InterPro; IPR036855; Znf_CCCH_sf.
DR PANTHER; PTHR13119:SF12; PROTEIN SUPPRESSOR OF SABLE; 1.
DR PANTHER; PTHR13119; ZINC FINGER CCCH DOMAIN-CONTAINING PROTEI; 1.
DR Pfam; PF00642; zf-CCCH; 1.
DR Pfam; PF14608; zf-CCCH_2; 1.
DR Pfam; PF18044; zf-CCCH_4; 1.
DR SMART; SM00356; ZnF_C3H1; 3.
DR SUPFAM; SSF90229; CCCH zinc finger; 2.
DR PROSITE; PS50103; ZF_C3H1; 3.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723, ECO:0000256|PROSITE-
KW ProRule:PRU00723}; Reference proteome {ECO:0000313|Proteomes:UP000231279};
KW Zinc {ECO:0000256|ARBA:ARBA00022833, ECO:0000256|PROSITE-ProRule:PRU00723};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00723}.
FT DOMAIN 427..454
FT /note="C3H1-type"
FT /evidence="ECO:0000259|PROSITE:PS50103"
FT DOMAIN 456..480
FT /note="C3H1-type"
FT /evidence="ECO:0000259|PROSITE:PS50103"
FT DOMAIN 481..509
FT /note="C3H1-type"
FT /evidence="ECO:0000259|PROSITE:PS50103"
FT ZN_FING 427..454
FT /note="C3H1-type"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00723"
FT ZN_FING 456..480
FT /note="C3H1-type"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00723"
FT ZN_FING 481..509
FT /note="C3H1-type"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00723"
FT REGION 1..26
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 374..415
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..20
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 396..415
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 861 AA; 94076 MW; EB9F1E8C2413325B CRC64;
MEDPSPTQNL SLNSSETAFS FPPHRRRPLR SRTYHALIGI LSHCRTDWPQ QNPQENGLCT
RNEANLADIL APLPNSKESA DTLYQQTSVG ENKNSIVFQD GDSDSTQASV PGLDLVNLVK
SGEQEVVPAS RISVEDFSMV ENQTGDCAIQ IAMEQENANS VLDMQMDEFG TLEELEVDED
FSIHEFSEAL NSCFGPDVVV ESSKAGEDSQ GNGTLLEENI PKTAEHELQL NEMELEKLLY
NSGAVEPSCC LNADEEIEEG EIAGAVGAVF EDAVSLGERT TERVHASEDP CGKEKVTCNE
EDRGQLRHEM SDPSLVNILN IDSNCMEVES RTAARLQDYH SQDVFHDGQM EAQRSGPMTP
CLENLTANGR ILQGNAAESR TPAAAEKDDD AKKKKRRRGP LTKERKDKKK NRKLGVRKLK
LKPILKPMIK TPCRHYLQGR CHEGEKCNFS HDAVPLTKSQ PCRYFACHTC MKGDDCPFDH
QLSKYPCDNY TTNGFCSRGS DCLFSHEIPA KQSFLVTPNV SKPELTGIKG GSSTISKFTK
PEVKFPSQLN NSNSSKHTDN SGIFHQKVDA KFSSAGNSPG MSAELVGAKP VPRTTGLTPK
GVSFLSNGGM SLVDSSRHKR DTSVKDNVGI DVSCKTILKM PGNVNKLSNM SDGVAPRKPR
GINFLSFTHP SSDGSGGEMF SDLLSNSNNE ARKSVLDDMG KGELACSLPQ SVGMLKVNRQ
MNQSATNLVP ASNEKVNGTP SRVPQHINFL NFDRISADVA ILKEGGKSPS SKDETALSFV
KERRNTQGDL QEATKRPSLS FDELTGQSTI GHNANLSTYF KTSLLSNTPS SVQKAVQSAL
SFAAKFESNI KVGSSLHQQR S
//
