ID A0A2G9I2D6_9LAMI Unreviewed; 643 AA.
AC A0A2G9I2D6;
DT 31-JAN-2018, integrated into UniProtKB/TrEMBL.
DT 31-JAN-2018, sequence version 1.
DT 27-MAR-2024, entry version 19.
DE RecName: Full=DYW domain-containing protein {ECO:0000259|Pfam:PF14432};
GN ORFNames=CDL12_03345 {ECO:0000313|EMBL:PIN23919.1};
OS Handroanthus impetiginosus.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance;
OC Handroanthus.
OX NCBI_TaxID=429701 {ECO:0000313|EMBL:PIN23919.1, ECO:0000313|Proteomes:UP000231279};
RN [1] {ECO:0000313|Proteomes:UP000231279}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. UFG-1 {ECO:0000313|Proteomes:UP000231279};
RX PubMed=29253216; DOI=10.1093/gigascience/gix125;
RA Silva-Junior O.B., Grattapaglia D., Novaes E., Collevatti R.G.;
RT "Genome assembly of the Pink Ipe (Handroanthus impetiginosus,
RT Bignoniaceae), a highly valued, ecologically keystone Neotropical timber
RT forest tree.";
RL Gigascience 7:1-16(2018).
CC -!- SIMILARITY: Belongs to the PPR family. PCMP-H subfamily.
CC {ECO:0000256|ARBA:ARBA00006643}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PIN23919.1}.
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DR EMBL; NKXS01000482; PIN23919.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2G9I2D6; -.
DR STRING; 429701.A0A2G9I2D6; -.
DR OrthoDB; 466279at2759; -.
DR Proteomes; UP000231279; Unassembled WGS sequence.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0009451; P:RNA modification; IEA:InterPro.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 3.
DR InterPro; IPR032867; DYW_dom.
DR InterPro; IPR046848; E_motif.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR045215; PPR_prot_At1g15510.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 3.
DR PANTHER; PTHR24015:SF1672; OS06G0506100 PROTEIN; 1.
DR PANTHER; PTHR24015; OS07G0578800 PROTEIN-RELATED; 1.
DR Pfam; PF14432; DYW_deaminase; 1.
DR Pfam; PF20431; E_motif; 1.
DR Pfam; PF01535; PPR; 6.
DR Pfam; PF13041; PPR_2; 2.
DR PROSITE; PS51375; PPR; 4.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000231279};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 69..103
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 171..205
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 233..267
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 335..369
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT DOMAIN 551..643
FT /note="DYW"
FT /evidence="ECO:0000259|Pfam:PF14432"
SQ SEQUENCE 643 AA; 71760 MW; 9954E81144CCF855 CRC64;
MISAEQFCVS LLNNCRTLRS LQQIQAHATK TGLDSDPFVA GKLLLHCAVH LSDAIDYARH
LLFHTPNPDP FMYNTLIRGL SDSDSPQNAI STFSLMLQNL DSPVDSFSLA FTLKSAANMR
CLRTGVQLHG QALTRGLNTH LFVGTTLISM YAECGRVDFA ENMFNEIPEP NVVTWNALVT
AFFRCVDVKG AQRVFDLMPA KNLASYNLML AGYTKLGEFE LARSVFGVMP TKDEVSWSTM
IVGLAQHGRF DEAFGYFREL QRVGMRPNEV SLTGVLSACA QAGALEFAKI IHGFIEKLGL
IWITPVNNAL MDTYSKCGSV DVARLVFQTM PGKKSIISWT SMIVGLAIQG YGEEALCLFH
EMEESGIKPD GVAFVAILYA CSHAGLVEQG CEIFDKMSKL YGITPEIEHY GCMVDLYGRA
GELSKAYNFI TQMPIPPNAI IWRTLLGACS FHGNIKLAEK VKKRLSELDP NHCGDHVLLS
NIYAIAGKWK DVATVRRSMA ELKLDKTPGW SMIEEDKNMY TLIAGTKEDA VTKEAYEKLK
EIMLRLRVEG GYVPEVVNVL HDIEEEEKED AIVTHSEKLA VAFGMTRLAK GSIIRIVKNL
RVCKDCHNVM KLISKVYKVE IMLRDRSRFH SFMNGVCSCR DYW
//
