ID A0A2G9I3Q4_9LAMI Unreviewed; 845 AA.
AC A0A2G9I3Q4;
DT 31-JAN-2018, integrated into UniProtKB/TrEMBL.
DT 31-JAN-2018, sequence version 1.
DT 27-MAR-2024, entry version 22.
DE SubName: Full=ATP-dependent RNA helicase {ECO:0000313|EMBL:PIN24240.1};
DE EC=3.6.4.12 {ECO:0000313|EMBL:PIN24240.1};
GN ORFNames=CDL12_03061 {ECO:0000313|EMBL:PIN24240.1};
OS Handroanthus impetiginosus.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance;
OC Handroanthus.
OX NCBI_TaxID=429701 {ECO:0000313|EMBL:PIN24240.1, ECO:0000313|Proteomes:UP000231279};
RN [1] {ECO:0000313|Proteomes:UP000231279}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. UFG-1 {ECO:0000313|Proteomes:UP000231279};
RX PubMed=29253216; DOI=10.1093/gigascience/gix125;
RA Silva-Junior O.B., Grattapaglia D., Novaes E., Collevatti R.G.;
RT "Genome assembly of the Pink Ipe (Handroanthus impetiginosus,
RT Bignoniaceae), a highly valued, ecologically keystone Neotropical timber
RT forest tree.";
RL Gigascience 7:1-16(2018).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PIN24240.1}.
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DR EMBL; NKXS01000444; PIN24240.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2G9I3Q4; -.
DR STRING; 429701.A0A2G9I3Q4; -.
DR OrthoDB; 34695at2759; -.
DR Proteomes; UP000231279; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
DR GO; GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR CDD; cd17991; DEXHc_TRCF; 1.
DR Gene3D; 2.40.10.170; -; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR Gene3D; 3.90.1150.50; Transcription-repair-coupling factor, D7 domain; 1.
DR InterPro; IPR003711; CarD-like/TRCF_RID.
DR InterPro; IPR036101; CarD-like/TRCF_RID_sf.
DR InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR037235; TRCF-like_C_D7.
DR PANTHER; PTHR14025; FANCONI ANEMIA GROUP M FANCM FAMILY MEMBER; 1.
DR PANTHER; PTHR14025:SF20; FANCONI ANEMIA GROUP M PROTEIN; 1.
DR Pfam; PF02559; CarD_TRCF_RID; 1.
DR Pfam; PF00270; DEAD; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR SMART; SM01058; CarD_TRCF; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM00490; HELICc; 1.
DR SUPFAM; SSF141259; CarD-like; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR SUPFAM; SSF143517; TRCF domain-like; 1.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Helicase {ECO:0000256|ARBA:ARBA00022806, ECO:0000313|EMBL:PIN24240.1};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801, ECO:0000313|EMBL:PIN24240.1};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000231279}.
FT DOMAIN 307..469
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
FT DOMAIN 487..644
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
SQ SEQUENCE 845 AA; 95577 MW; 22F600D34BB11110 CRC64;
MASAKTYGYS ISTDVVAGTP SLSALIERSY SNPTANAKQW LPLSLSSARF GLRLRVRGVL
SSSPWYPSVA LRNMNDNYIS VPSKIRTPTE AEQRDAISLL NERIRREHCK RESSSSRPAM
NSEEAETYIQ LVKEQQQRGL QKLKGDRTGG ASGAFSYKVD PHTLRPGDYV VHKKVGVGRF
AGVKFDVPKA SSEPIEYVFI EYADGMAKLP VKQASRMLYR YNLPNETKKP RSLSKLSDTS
AWERRRIKGK VAVQKMVVDL MELYLQRLKQ RQPPSPKSPA MDEFASQFPY EPTPDQKQAF
MDVERDLTER ENPMDRLICG DVGFGKTEVA LRAIFCVVSA GKQAMVLAPT IVLAKQHFDV
ISERFSRHPN IKVGLLSRFQ TKLEKETHLQ MIKNGDLDIT VGTHSLLGDR VVYNNLGLLV
VDEEQRFGVK QKEKIASFKT SVDVLTLSAT PIPRTLYLAL TGFRDASLIS TPPPERVPIR
THLSAYTKEK VMSAIRHELD RGGQVFYVLP RIKGLEEVME FLGQSFPNVE IAIAHGKQYS
RQLEETMEKF AQGHIKILIC TNIVESGLDI QNANTIIIQD VQQFGLAQLY QLRGRVGRAD
KEAHAFLFYP DKSFLSDQAL ERLAALEECR DLGQGFQLAE KDMAIRGFGN IFGEQQTGDV
GNVGIDLFFE MLFESLSKVD EHRVVSVPYH SVQFDMNLNT HLPSEYINYL ENPLETINEA
EKAAEKDIWN LIQFTENLRR QYGKEPYSME ILLKKLYVRR MAADLGIITI YASGKMVGMK
SNLSKKVFKL MIDSMASEVH RTSLVYKDGL IKAELLLELP REQLLNWIFQ CLAELYASLP
ALIKY
//
