ID A0A2H5N3W9_CITUN Unreviewed; 927 AA.
AC A0A2H5N3W9;
DT 28-FEB-2018, integrated into UniProtKB/TrEMBL.
DT 28-FEB-2018, sequence version 1.
DT 27-MAR-2024, entry version 24.
DE RecName: Full=Smr domain-containing protein {ECO:0000259|PROSITE:PS50828};
GN ORFNames=CUMW_011680 {ECO:0000313|EMBL:GAY34481.1};
OS Citrus unshiu (Satsuma mandarin) (Citrus nobilis var. unshiu).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus.
OX NCBI_TaxID=55188 {ECO:0000313|EMBL:GAY34481.1};
RN [1] {ECO:0000313|EMBL:GAY34481.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=29259619; DOI=10.3389/fgene.2017.00180;
RA Shimizu T., Tanizawa Y., Mochizuki T., Nagasaki H., Yoshioka T., Toyoda A.,
RA Fujiyama A., Kaminuma E., Nakamura Y.;
RT "Draft sequencing of the heterozygous diploid genome of Satsuma (Citrus
RT unshiu Marc.) using a hybrid assembly approach.";
RL Front. Genet. 8:180-180(2017).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:GAY34481.1}.
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DR EMBL; BDQV01000002; GAY34481.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2H5N3W9; -.
DR STRING; 55188.A0A2H5N3W9; -.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0004519; F:endonuclease activity; IEA:UniProtKB-KW.
DR GO; GO:0030983; F:mismatched DNA binding; IEA:InterPro.
DR GO; GO:0006298; P:mismatch repair; IEA:InterPro.
DR GO; GO:0045910; P:negative regulation of DNA recombination; IEA:InterPro.
DR Gene3D; 3.30.1370.110; -; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR InterPro; IPR000432; DNA_mismatch_repair_MutS_C.
DR InterPro; IPR007696; DNA_mismatch_repair_MutS_core.
DR InterPro; IPR036187; DNA_mismatch_repair_MutS_sf.
DR InterPro; IPR046893; MSSS.
DR InterPro; IPR005747; MutS2.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR002625; Smr_dom.
DR InterPro; IPR036063; Smr_dom_sf.
DR PANTHER; PTHR48378; DNA MISMATCH REPAIR PROTEINS MUTS FAMILY DOMAIN-CONTAINING PROTEIN-RELATED; 1.
DR PANTHER; PTHR48378:SF2; SMR DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF20297; MSSS; 1.
DR Pfam; PF00488; MutS_V; 1.
DR Pfam; PF01713; Smr; 1.
DR PIRSF; PIRSF005814; MutS_YshD; 2.
DR SMART; SM00534; MUTSac; 1.
DR SMART; SM00533; MUTSd; 1.
DR SMART; SM00463; SMR; 1.
DR SUPFAM; SSF48334; DNA repair protein MutS, domain III; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR SUPFAM; SSF160443; SMR domain-like; 1.
DR PROSITE; PS00486; DNA_MISMATCH_REPAIR_2; 1.
DR PROSITE; PS50828; SMR; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Coiled coil {ECO:0000256|SAM:Coils};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Endonuclease {ECO:0000256|ARBA:ARBA00022759};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022759};
KW Nuclease {ECO:0000256|ARBA:ARBA00022722};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741}.
FT DOMAIN 856..927
FT /note="Smr"
FT /evidence="ECO:0000259|PROSITE:PS50828"
FT REGION 748..768
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 802..850
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 200..227
FT /evidence="ECO:0000256|SAM:Coils"
FT COILED 299..326
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 752..768
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 831..850
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 927 AA; 103197 MW; 12C88453CCDBB636 CRC64;
MQLCNGNHFL YPQNSPIIYR HHRKLIRNCK PTVLSVANSP KLGLSESLQQ ETLLSLEWPT
LCQQLSSFTQ TSMGHAVVQK AQIPFGKSLE ESQKLLNQTS AALAMMQSQP LDLSTIEDIA
GILNSAVSGQ LLSPSEICAV RRTLRAVNNV WKKLTEAAEL DGDSLQRYSP LLELLKNCNF
VTELEEKIEF CLDCKLLIIL DRASEDLELI RAERKRNMEN LDSLLKKVAA QIFQAGGIDK
PLITKRRSRM CVGIKASHKY LLPDGIVLNV SSSGATYFME PKEAVEFNNM EVRLSNSEIA
EETAILSLLT AEIAKSEREI KYLMDRILEI DLAFARAGFA QWMDGVCPIL SSKSQVSFDF
SINIEGIQQP LLLGSSLRSL SAASSNSNPL KSDVENSEMT VGSLSKGISD FPVPIDIKVE
CETRVVVITG PNTGGKTASM KTLGLASLMS KAGLYLPAKN HPRLPWFDLI LADIGDRQSL
EQNLSTFSGH ISRIVDILEV VSRESLVLID EIGSGTDPSE GVALATSILQ YLRDRVGLAI
VTTHYADLSC LKDKDTRFEN AAMEFSLDTL RPTYRILWGS TGDSNALNIA KSIGFDRKII
QRAQKLVERL RPERQQHRKS ELYQSLMEER RKLESQARTA ASLHAEITDL YRENYGCLMT
FIRFPFSLTS RLKIDDEAKD LDRRATHLKA KETQQVQQEL NSAKAQIDTV VQEFENRLRT
ASADEINSLI KESESAIAAI VEAHRPDDDF SVGETNTSSF SPQSGEQVHV KSLGDKLATV
VEVPGDDDSV LVQYGKMRVR VKKNNIRPIP NSKRKNAANP APRLRKQQED RQSGSAGSSN
EEASYGPRVQ MSKNSLDLRG MRVEEASHQL DIALACWESR SVLFVIHGMG TGVVKERVLE
ILRNHPRVAK FEQESPMNYG CTVAYIK
//
