ID A0A2H5P005_CITUN Unreviewed; 1791 AA.
AC A0A2H5P005;
DT 28-FEB-2018, integrated into UniProtKB/TrEMBL.
DT 28-FEB-2018, sequence version 1.
DT 27-MAR-2024, entry version 17.
DE RecName: Full=Clu domain-containing protein {ECO:0000259|PROSITE:PS51823};
GN ORFNames=CUMW_091440 {ECO:0000313|EMBL:GAY45713.1};
OS Citrus unshiu (Satsuma mandarin) (Citrus nobilis var. unshiu).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus.
OX NCBI_TaxID=55188 {ECO:0000313|EMBL:GAY45713.1};
RN [1] {ECO:0000313|EMBL:GAY45713.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=29259619; DOI=10.3389/fgene.2017.00180;
RA Shimizu T., Tanizawa Y., Mochizuki T., Nagasaki H., Yoshioka T., Toyoda A.,
RA Fujiyama A., Kaminuma E., Nakamura Y.;
RT "Draft sequencing of the heterozygous diploid genome of Satsuma (Citrus
RT unshiu Marc.) using a hybrid assembly approach.";
RL Front. Genet. 8:180-180(2017).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:GAY45713.1}.
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DR EMBL; BDQV01000030; GAY45712.1; -; Genomic_DNA.
DR EMBL; BDQV01000030; GAY45713.1; -; Genomic_DNA.
DR EMBL; BDQV01000030; GAY45714.1; -; Genomic_DNA.
DR EMBL; BDQV01000030; GAY45715.1; -; Genomic_DNA.
DR STRING; 55188.A0A2H5P005; -.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.
DR GO; GO:0051640; P:organelle localization; IEA:UniProt.
DR GO; GO:0006996; P:organelle organization; IEA:InterPro.
DR CDD; cd15466; CLU-central; 1.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 1.
DR InterPro; IPR033646; CLU-central.
DR InterPro; IPR025697; CLU_dom.
DR InterPro; IPR028275; CLU_N.
DR InterPro; IPR027523; CLU_prot.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR InterPro; IPR019734; TPR_repeat.
DR PANTHER; PTHR12601; EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT EIF-3; 1.
DR PANTHER; PTHR12601:SF17; PROTEIN REDUCED CHLOROPLAST COVERAGE 1; 1.
DR Pfam; PF15044; CLU_N; 1.
DR Pfam; PF12807; eIF3_p135; 1.
DR Pfam; PF13374; TPR_10; 1.
DR Pfam; PF13424; TPR_12; 1.
DR SMART; SM00028; TPR; 3.
DR SUPFAM; SSF48452; TPR-like; 1.
DR PROSITE; PS51823; CLU; 1.
DR PROSITE; PS50005; TPR; 1.
PE 4: Predicted;
KW Cytoplasm {ECO:0000256|ARBA:ARBA00022490};
KW TPR repeat {ECO:0000256|PROSITE-ProRule:PRU00339}.
FT DOMAIN 299..573
FT /note="Clu"
FT /evidence="ECO:0000259|PROSITE:PS51823"
FT REPEAT 887..920
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT REGION 132..171
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 567..644
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1083..1120
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1250..1290
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1320..1342
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1428..1477
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 133..147
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 148..171
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 567..592
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 604..622
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 623..637
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1094..1110
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1251..1290
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1434..1457
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1791 AA; 198266 MW; A69CEB7938F456AE CRC64;
MAPRNSRGKA KNEKKKKEEK VLPVVLDITV NLPDDTRVIL KGISTDRIID VRRLLSVNTE
TCSITNFSLS HEIRGPRLKD AVDVAALKPC VLSLTEEDYD EGGAAAHVRR VLDIVACTTS
FGPCGFDAGK NVPDSKSAKK TTAKNEKDKQ SQPPSSPQSK NSKSSNDVTV DGDGEMSHAF
PKLSSFYEFF SLSHLTPPLQ FIRKAPKRRV KLCNGKMVNV EACRKGFYSV GKQRILCHNI
VDLLGQLSRA FDNAYNELMK AFSERNKFGN LPYGFRANTW LIPPIAAQSP SVFPPLPAED
EAWGGNGGGL GRDGKSDLIP WANEFLFVAS MPCKTAEERQ IRDRKAFLLH NLFVDVAIFR
AIKAVHHVMG KPELIYPSNC KILYTEIIGD LRIAIMKDAS NACCKVDTKI DGSQATGVDK
NNLVERNLLK GITADENTAA HDVATLGVVN VRYCGYIAVV KVQERENKKV GPLFQSIELE
QPEGGANALN INSLRLLLHE TTTLEDNKPA PNLQNLEREE LNASQMFVER LLEESIAKLE
EEKPEREHFV RWELGACWIQ HLQDQKNAEK DKKLSKEKAK KLSNEKAKSE MKVEGLGTPL
KSLKNNRKKS EGSNHKIHSE TLKSQADGVN GESEKATSAS IEARLESRDK ENELALKNLL
SDEAFARLKE SETGLHCKSL EELIDLSHNY YVEVALPKLV TDFGSLELSP VDGRTLTDFM
HTRGLQMRSL GHVVKLSEKL SHVQSLCIHE MIVRAFKHII QAVISAVGNT QRMAVSIAAA
LNLMLGVHES DGLNKSHNVH PLVWRWLELF LMKRYEWDLN GLNFKDVRKF AILRGLCHKV
GIELVSRDFD MDSPSPFRKI DVVSLVPVHK ALAKLVAVCG PYHRMTAGAY SLLAVVLYHT
GDFNQATIYQ QKALDINERE LGLDHPDTMK SYGDLAVFYY RLQHTELALK YVKRALYLLH
LTCGPSHPNT AATYINVAMM EEGLGNVHVA LRYLHKALKC NQRLLDSSKL PCMSMHFHMW
RLTFDCSGMN KTTCRFFEQS WAQMICVTVY RIYLTTLIQR RNVSTLKRKT YVAKVKGNFY
QDNNLTSPDG SSKEVLRESS DEETHAPEPE SDTDVNQGSS IPFQQQELVV EESAVEKPNI
TEEISSAIHE EGDDGWQPVQ RLRSAGSYGR RLKQRRATIG KVHSYQKRNA DAVIDYSSAK
SSHHSSRYYL LKKRAVSHGS SADHHPVTTF HGTKFGRRVV KAVAYRVKSM PSSAKTGTVE
ASINGSEPSS SPSESRPASA PNDTSSVKNS IISLGKSPSY KEVAVAPPGT IAMLQVRVPQ
SDNPDNQEFS FGKPEDGTME EKENVDTNVT GAEKINEEKS NSVLDATDNL KEETGVHPNR
EETHISDGLE DNPSVVVSES ERGVGSVVDI HKVVQDGILI NGIPNSIDSP TSEFYEKDSS
ESIESHDNTK STLQVADDLK EKPSVFNPGD TRGLPNRKLS ASAAPFNPSP AVVRASAVAI
NMTLPPGPGA VTAVAPWPVN MTLHPRPATV LPTVNPMCSS PHQPYPSPPS TPNMMQPLPF
MYPPYTQPQG VPTSTFPVTT SAFHHNHFSW QCNGNSNVPE FIPGPFLPGY HPMEFSVPPP
VVEPILDPIM RLKAQSGDLD SSCSASILPE NIDAVGDAEK EVDLLASKSM DNANEVAGIG
RETVRGEFVK ENGHLNLCGT KNAGSEPVHF NSQNQSLRRN VEREIEGEKT FSILVRGRRN
RKQTLRIPIS LLSRPYGSQS FKVVYNRVIR GSEAPKSFSF SSTGDSTATA V
//
