ID A0A2H5PSC0_CITUN Unreviewed; 1121 AA.
AC A0A2H5PSC0;
DT 28-FEB-2018, integrated into UniProtKB/TrEMBL.
DT 28-FEB-2018, sequence version 1.
DT 27-MAR-2024, entry version 24.
DE RecName: Full=MBD domain-containing protein {ECO:0000259|PROSITE:PS50982};
GN ORFNames=CUMW_162950 {ECO:0000313|EMBL:GAY55241.1};
OS Citrus unshiu (Satsuma mandarin) (Citrus nobilis var. unshiu).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus.
OX NCBI_TaxID=55188 {ECO:0000313|EMBL:GAY55241.1, ECO:0000313|Proteomes:UP000236630};
RN [1] {ECO:0000313|EMBL:GAY55241.1, ECO:0000313|Proteomes:UP000236630}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Miyagawa wase {ECO:0000313|Proteomes:UP000236630};
RX PubMed=29259619; DOI=10.3389/fgene.2017.00180;
RA Shimizu T., Tanizawa Y., Mochizuki T., Nagasaki H., Yoshioka T., Toyoda A.,
RA Fujiyama A., Kaminuma E., Nakamura Y.;
RT "Draft sequencing of the heterozygous diploid genome of Satsuma (Citrus
RT unshiu Marc.) using a hybrid assembly approach.";
RL Front. Genet. 8:180-180(2017).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:GAY55241.1}.
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DR EMBL; BDQV01000116; GAY55241.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2H5PSC0; -.
DR STRING; 55188.A0A2H5PSC0; -.
DR Proteomes; UP000236630; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR InterPro; IPR016177; DNA-bd_dom_sf.
DR InterPro; IPR038945; MBD13-like.
DR InterPro; IPR001739; Methyl_CpG_DNA-bd.
DR PANTHER; PTHR34067; OS04G0193200 PROTEIN; 1.
DR PANTHER; PTHR34067:SF20; OS08G0206700 PROTEIN; 1.
DR Pfam; PF01429; MBD; 1.
DR SUPFAM; SSF54171; DNA-binding domain; 3.
DR PROSITE; PS50982; MBD; 2.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000236630};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 123..198
FT /note="MBD"
FT /evidence="ECO:0000259|PROSITE:PS50982"
FT DOMAIN 216..283
FT /note="MBD"
FT /evidence="ECO:0000259|PROSITE:PS50982"
FT REGION 51..134
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 184..210
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 378..401
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 523..548
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 600..639
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 792..829
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 854..876
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 934..985
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1027..1105
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 61..120
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 957..980
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1065..1082
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1083..1105
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1121 AA; 123275 MW; 84E0E51DC2714AB0 CRC64;
MAGESEERLP TDWTAKFKVE KNGRKTKYYM NVRTGQKFFS KEDLLRYVKM KRTQLDEPSP
TSSHGKRHLE NSSSKLVAKE NKQENSRSKR HSENRSMKPV AEENSHDNGH GKRHSENSST
KPVVDENNRP DWLPDGWVVD LKTRKSGSAV GRQYKVYIEP ITGCKFFSMP EVLRHLESVK
NRNSECERKT TPTETSKYEG TRKVSTKRER EATERVVVEK STVVDLPPSW TKETKIKKTA
RGIRKDRYFT DPVSGYVFCS KKDVFRYLET GEISKYAFKP RKRGADASEL VTDEALPFPY
AKRLKLDHTA TRRQLFPVKE SSDICSPEVM KAEVLNKRRG KEVSRLAGAP TAEIPPEPMA
KMVIDKGAET KVISNLSSSA PPKLRRSKRN QGKMVFADNG PVSTPVIDSL QEQRLLDSHI
ECSNGKTLND MTKSAKRKKL NFPLRSSKRL VGLEPELVSN CMSIEQAPKK VTTESCKNMV
ISSAVLTSTG LVNKVSQHLK AGSVPELANV SSDVTILSSG EPLNKVKSSR SRTTPGEQLQ
KLKSAETSGD MSEQRVSLFF GNSYLDPCLG PAFKALIGEL PVNSNPASGP VLNPAADILQ
ETSMQTTDGE KRSSRKTRIN SMQSKNKQEL SLPRRSSKRL AGLEPEMMAN CESLERVRAP
KNIITESCKS KGTAAGLTSS SLVDEVSQQL KAGPVLGLPN RASVVLGLAK CVSSSRKPLN
KIKSSGNLAI IGGQSAEAND DKSEPHLSLT FGGTNLNPCK TMMGETLVDS LPDSDPVSTT
ADILTEKKLQ ETKVEKSNNK KTRINSKKSK NKQQLNLSRR SSKRLAGLEP ELVSNSISGE
QAWGNATVES CKSEAPTCEK TDPHGLPDGV SQQSEAGHET MLAQHDLPNG VSQQVEAGHE
TMLAQHDLPN GVSQQVEAGH ETMLAQHDPT DILTPLLESS DKSGKPLEAQ TVPEEPSQKL
ENEKPEEQPQ KLESERMDIE NPDSQVLLPY GDSWSDPCLE FAFKTLTGAI PVDENLAIQD
YFQHQLDPSD TQKDNSLAMP EFGPIKSFQT DVPHQLDTPE KQPAPAPQQQ LPANPLPPPG
NASTPSSKDA EGRNLNFQCG NPIVSSPSFS SIDGAVLLCS V
//
