ID A0A2H5QHA1_CITUN Unreviewed; 570 AA.
AC A0A2H5QHA1;
DT 28-FEB-2018, integrated into UniProtKB/TrEMBL.
DT 28-FEB-2018, sequence version 1.
DT 27-MAR-2024, entry version 20.
DE RecName: Full=TRAFD1/XAF1 zinc finger domain-containing protein {ECO:0000259|Pfam:PF21366};
GN ORFNames=CUMW_230190 {ECO:0000313|EMBL:GAY64006.1};
OS Citrus unshiu (Satsuma mandarin) (Citrus nobilis var. unshiu).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus.
OX NCBI_TaxID=55188 {ECO:0000313|EMBL:GAY64006.1, ECO:0000313|Proteomes:UP000236630};
RN [1] {ECO:0000313|EMBL:GAY64006.1, ECO:0000313|Proteomes:UP000236630}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Miyagawa wase {ECO:0000313|Proteomes:UP000236630};
RX PubMed=29259619; DOI=10.3389/fgene.2017.00180;
RA Shimizu T., Tanizawa Y., Mochizuki T., Nagasaki H., Yoshioka T., Toyoda A.,
RA Fujiyama A., Kaminuma E., Nakamura Y.;
RT "Draft sequencing of the heterozygous diploid genome of Satsuma (Citrus
RT unshiu Marc.) using a hybrid assembly approach.";
RL Front. Genet. 8:180-180(2017).
CC -!- SIMILARITY: Belongs to the UFD1 family.
CC {ECO:0000256|ARBA:ARBA00006043}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:GAY64006.1}.
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DR EMBL; BDQV01000384; GAY64006.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2H5QHA1; -.
DR STRING; 55188.A0A2H5QHA1; -.
DR Proteomes; UP000236630; Unassembled WGS sequence.
DR GO; GO:0006511; P:ubiquitin-dependent protein catabolic process; IEA:InterPro.
DR Gene3D; 3.10.330.10; -; 1.
DR Gene3D; 2.40.40.50; Ubiquitin fusion degradation protein UFD1, N-terminal domain; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR049439; TRAFD1-XIAF1_Znf.
DR InterPro; IPR004854; Ufd1-like.
DR InterPro; IPR042299; Ufd1-like_Nn.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR12555; UBIQUITIN FUSION DEGRADATON PROTEIN 1; 1.
DR PANTHER; PTHR12555:SF13; UBIQUITIN RECOGNITION FACTOR IN ER-ASSOCIATED DEGRADATION PROTEIN 1; 1.
DR Pfam; PF21366; TRAFD1-XIAF1_ZnF; 1.
DR Pfam; PF03152; UFD1; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000236630};
KW Ubl conjugation pathway {ECO:0000256|ARBA:ARBA00022786}.
FT DOMAIN 533..562
FT /note="TRAFD1/XAF1 zinc finger"
FT /evidence="ECO:0000259|Pfam:PF21366"
FT REGION 1..49
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 570 AA; 63681 MW; 67BD7FA9DBDE7CE7 CRC64;
MDFELRRARE KLEKEQKERK ERARLKLERE KKAKEEAKKQ REAIEAAQRS RRLDAIDAQL
KADQEMQESL LAGGGIVFYH TLEALPFQGS GDKIKLPPSC FTELSGQGAF DKGPLHFKLS
VLHQEGPSNM EDGEKESNRS THSGVLEFTA DEGFVGLPPH VWRNLFPSDT PNNSFVEVRY
VRLPKGTYAK LQPEGIGFAE LPNQKAVLET SLRQHATLSQ DDVLTVNYGE LAYKLKVLEL
KPSSSVSVLE TDIEVDIVSP DDMSAGTDQY TLKPLLFGKS ESGMVEEGKY VFYKFTIDDD
TRKKIVSGEK RAEVRVDSEI DGGDTSIYVS RHPLLFPTRH LHEWSSHDAG SKVVILSSKD
KSVDVGTYSI GVYGFKGMTK FQVLVTLEDD SGRKVGQEAT SSSSSIEMDT VQCKNCKRFI
PSRSIVLHEA YCSRHSVACQ HAGCGMVLRT EEARDHVHCD KCGQGLQRRE MEKHMKVFHE
QCSCPCGVVL ENAAMVRHQA SDCPLRLITC RFCGDMVQAG TSAMDVRDRM RGLSEHESIC
GSRTAPCDSC GRAVMLKDMD IHQIAVHQKS
//
