ID A0A2I0ASQ6_9ASPA Unreviewed; 336 AA.
AC A0A2I0ASQ6;
DT 28-FEB-2018, integrated into UniProtKB/TrEMBL.
DT 28-FEB-2018, sequence version 1.
DT 22-FEB-2023, entry version 17.
DE RecName: Full=THUMP domain-containing protein {ECO:0000259|PROSITE:PS51165};
GN ORFNames=AXF42_Ash008862 {ECO:0000313|EMBL:PKA58575.1};
OS Apostasia shenzhenica.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Asparagales; Orchidaceae;
OC Apostasioideae; Apostasia.
OX NCBI_TaxID=1088818 {ECO:0000313|EMBL:PKA58575.1, ECO:0000313|Proteomes:UP000236161};
RN [1] {ECO:0000313|EMBL:PKA58575.1, ECO:0000313|Proteomes:UP000236161}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Shenzhen {ECO:0000313|Proteomes:UP000236161};
RC TISSUE=Stem {ECO:0000313|EMBL:PKA58575.1};
RX PubMed=28902843; DOI=10.1038/nature23897;
RA Zhang G.Q., Liu K.W., Li Z., Lohaus R., Hsiao Y.Y., Niu S.C., Wang J.Y.,
RA Lin Y.C., Xu Q., Chen L.J., Yoshida K., Fujiwara S., Wang Z.W., Zhang Y.Q.,
RA Mitsuda N., Wang M., Liu G.H., Pecoraro L., Huang H.X., Xiao X.J., Lin M.,
RA Wu X.Y., Wu W.L., Chen Y.Y., Chang S.B., Sakamoto S., Ohme-Takagi M.,
RA Yagi M., Zeng S.J., Shen C.Y., Yeh C.M., Luo Y.B., Tsai W.C.,
RA Van de Peer Y., Liu Z.J.;
RT "The Apostasia genome and the evolution of orchids.";
RL Nature 549:379-383(2017).
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DR EMBL; KZ451951; PKA58575.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2I0ASQ6; -.
DR STRING; 1088818.A0A2I0ASQ6; -.
DR OrthoDB; 550044at2759; -.
DR Proteomes; UP000236161; Unassembled WGS sequence.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0006400; P:tRNA modification; IEA:InterPro.
DR CDD; cd11717; THUMP_THUMPD1_like; 1.
DR Gene3D; 3.30.2300.10; THUMP superfamily; 1.
DR InterPro; IPR004114; THUMP_dom.
DR InterPro; IPR040183; THUMPD1-like.
DR PANTHER; PTHR13452; THUMP DOMAIN CONTAINING PROTEIN 1-RELATED; 1.
DR PANTHER; PTHR13452:SF10; THUMP DOMAIN-CONTAINING PROTEIN 1; 1.
DR Pfam; PF02926; THUMP; 1.
DR SMART; SM00981; THUMP; 1.
DR SUPFAM; SSF143437; THUMP domain-like; 1.
DR PROSITE; PS51165; THUMP; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000236161};
KW RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00529}.
FT DOMAIN 212..318
FT /note="THUMP"
FT /evidence="ECO:0000259|PROSITE:PS51165"
FT REGION 50..138
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 62..138
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 336 AA; 37734 MW; 425E5547C9E0E382 CRC64;
MQKPVKKGLY PLRPGVQGFF ITCDGGRERQ ALNEAVNLLE SFYEEIIHGS DSGSKSWAVP
DKPVNKKIKF KDSDSSSDGE DKAPTEGGEA KDNEETIEKS VEHRNDPEQG ENEPREREDK
EAEEHVQPSE CTSIKRRRLD KDASVYETAD LGNPNDKPID ELIEDELNEL ANRNKRHFVS
LDSGCNGCIF VQMQKWHGDP SPAAIAQHMI SSAALTKKHI SRFILRVLPA EVTCYASEEE
ITEAIKPLIA QYFPDDTSTP QKFAVLYEAR SNTGIERMTI INAVAKSVPQ PHKVDLKNPD
KTIIVQIAKT ICMVGVVERY KELAKYNLRQ LTSPQE
//
