ID A0A2I0HPG4_PUNGR Unreviewed; 755 AA.
AC A0A2I0HPG4;
DT 28-FEB-2018, integrated into UniProtKB/TrEMBL.
DT 28-FEB-2018, sequence version 1.
DT 24-JAN-2024, entry version 18.
DE RecName: Full=BED-type domain-containing protein {ECO:0000259|PROSITE:PS50808};
GN ORFNames=CRG98_045983 {ECO:0000313|EMBL:PKI33627.1};
OS Punica granatum (Pomegranate).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Myrtales; Lythraceae; Punica.
OX NCBI_TaxID=22663 {ECO:0000313|EMBL:PKI33627.1, ECO:0000313|Proteomes:UP000233551};
RN [1] {ECO:0000313|EMBL:PKI33627.1, ECO:0000313|Proteomes:UP000233551}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. AG2017 {ECO:0000313|Proteomes:UP000233551};
RC TISSUE=Leaf {ECO:0000313|EMBL:PKI33627.1};
RA Akparov Z., Amiraslanov A., Hajiyeva S., Abbasov M., Kaur K., Hamwieh A.,
RA Solovyev V., Salamov A., Braich B., Kosarev P., Mahmoud A., Hajiyev E.,
RA Babayeva S., Izzatullayeva V., Mammadov A., Mammadov A., Sharifova S.,
RA Ojaghi J., Eynullazada K., Bayramov B., Abdulazimova A., Shahmuradov I.;
RT "De-novo sequencing of pomegranate (Punica granatum L.) genome.";
RL Submitted (NOV-2017) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBUNIT: Homodimer. {ECO:0000256|ARBA:ARBA00011738}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PKI33627.1}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; PGOL01006509; PKI33627.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2I0HPG4; -.
DR STRING; 22663.A0A2I0HPG4; -.
DR Proteomes; UP000233551; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0046983; F:protein dimerization activity; IEA:InterPro.
DR GO; GO:0009791; P:post-embryonic development; IEA:UniProt.
DR InterPro; IPR045259; DAYSLEEPER-like.
DR InterPro; IPR025525; hAT-like_transposase_RNase-H.
DR InterPro; IPR008906; HATC_C_dom.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR003656; Znf_BED.
DR InterPro; IPR036236; Znf_C2H2_sf.
DR PANTHER; PTHR23272; BED FINGER-RELATED; 1.
DR PANTHER; PTHR23272:SF148; BED-TYPE DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF05699; Dimer_Tnp_hAT; 1.
DR Pfam; PF14372; hAT-like_RNase-H; 1.
DR Pfam; PF02892; zf-BED; 1.
DR SMART; SM00614; ZnF_BED; 1.
DR SUPFAM; SSF57667; beta-beta-alpha zinc fingers; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR PROSITE; PS50808; ZF_BED; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000233551};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00027}.
FT DOMAIN 108..163
FT /note="BED-type"
FT /evidence="ECO:0000259|PROSITE:PS50808"
SQ SEQUENCE 755 AA; 85269 MW; 7B23849BB7A17216 CRC64;
MGLYTGGPSP CPDPCPTGSD PLFTVTCRLS ASSEFRYRSE TFRVGPISCP KSGTSTANVE
LRWSSPGDQR RAGLDPGPCS SLVSSYSVKS EVHVIMDLSD AVMFNSSRLK SVVWNDFDRV
KKGDNLMAIC KHCKKRMSGS GTSGTSHLRN HLMRCQRRGN HDIVQFASRG KKRGRPPALG
NTSFNQDPKE EISPLAVIKP DDPIKDETVP VTALTSNFDQ RRSQFDLARM IILHGYPLNM
VEHIGFRRFV KNVQPLFELA SSNKVEADCL EIYEKEKQKL FEMLDKLPGK ISLALDVWSS
SDDSLYFSLI SHFIDDSWQL KKKILSFLKI DSSNTEDMQA DSIMTCLMDW DIDRKLFSVT
SDGSSTNTIV SRIKDRLMQN RFLFGNGQLF DVQCLASLLN LMVQHAMEAL HEVIPKVRGS
IRYVKSSRVM QEKFKQMTQR ENIEGPKCLS LDNRLRWDST YRMLEAALVY KGAFALLREN
DPKFISWPSD VEWEKVGSVT GFLNVFLDIM NDFSRSKCPT ANIYFPLICD IHLKLISWCE
SSDEFISSLA MKMRNEFDDY WERCSLGLAV AVFLDPRFKM KLVEYYFPQI YGSGAQERIN
NISNHIKALY NEHSIGSPLA SADHCLAWQV DGSSGGISSP GSSSSNRLVG FEKFLNETSQ
SDGAKTDLDK YLEEPLFPRN VDFNVLNWWK VHTPRYPILS MMARNVLGIQ MSKVSSESAF
DLMGKILERD RSSLGAATLQ ALMCSQDWIG SELES
//
