ID A0A2I0IUL8_PUNGR Unreviewed; 1289 AA.
AC A0A2I0IUL8;
DT 28-FEB-2018, integrated into UniProtKB/TrEMBL.
DT 28-FEB-2018, sequence version 1.
DT 27-MAR-2024, entry version 26.
DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:PKI47687.1};
GN ORFNames=CRG98_031924 {ECO:0000313|EMBL:PKI47687.1};
OS Punica granatum (Pomegranate).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Myrtales; Lythraceae; Punica.
OX NCBI_TaxID=22663 {ECO:0000313|EMBL:PKI47687.1, ECO:0000313|Proteomes:UP000233551};
RN [1] {ECO:0000313|EMBL:PKI47687.1, ECO:0000313|Proteomes:UP000233551}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. AG2017 {ECO:0000313|Proteomes:UP000233551};
RC TISSUE=Leaf {ECO:0000313|EMBL:PKI47687.1};
RA Akparov Z., Amiraslanov A., Hajiyeva S., Abbasov M., Kaur K., Hamwieh A.,
RA Solovyev V., Salamov A., Braich B., Kosarev P., Mahmoud A., Hajiyev E.,
RA Babayeva S., Izzatullayeva V., Mammadov A., Mammadov A., Sharifova S.,
RA Ojaghi J., Eynullazada K., Bayramov B., Abdulazimova A., Shahmuradov I.;
RT "De-novo sequencing of pomegranate (Punica granatum L.) genome.";
RL Submitted (NOV-2017) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PKI47687.1}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; PGOL01002469; PKI47687.1; -; Genomic_DNA.
DR STRING; 22663.A0A2I0IUL8; -.
DR Proteomes; UP000233551; Unassembled WGS sequence.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0004523; F:RNA-DNA hybrid ribonuclease activity; IEA:InterPro.
DR GO; GO:0015074; P:DNA integration; IEA:InterPro.
DR GO; GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.
DR CDD; cd00303; retropepsin_like; 1.
DR CDD; cd01647; RT_LTR; 1.
DR Gene3D; 3.10.20.370; -; 1.
DR Gene3D; 3.30.70.270; -; 2.
DR Gene3D; 2.40.70.10; Acid Proteases; 1.
DR Gene3D; 3.10.10.10; HIV Type 1 Reverse Transcriptase, subunit A, domain 1; 1.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR043502; DNA/RNA_pol_sf.
DR InterPro; IPR000467; G_patch_dom.
DR InterPro; IPR001584; Integrase_cat-core.
DR InterPro; IPR021109; Peptidase_aspartic_dom_sf.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR002156; RNaseH_domain.
DR InterPro; IPR036397; RNaseH_sf.
DR InterPro; IPR000477; RT_dom.
DR InterPro; IPR041577; RT_RNaseH_2.
DR PANTHER; PTHR24559:SF437; RIBONUCLEASE H; 1.
DR PANTHER; PTHR24559; TRANSPOSON TY3-I GAG-POL POLYPROTEIN; 1.
DR Pfam; PF01585; G-patch; 1.
DR Pfam; PF17919; RT_RNaseH_2; 1.
DR Pfam; PF00078; RVT_1; 1.
DR Pfam; PF13456; RVT_3; 1.
DR SMART; SM00443; G_patch; 1.
DR SUPFAM; SSF56672; DNA/RNA polymerases; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 2.
DR PROSITE; PS50174; G_PATCH; 1.
DR PROSITE; PS50994; INTEGRASE; 1.
PE 4: Predicted;
KW DNA recombination {ECO:0000256|ARBA:ARBA00023172};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000233551}.
FT DOMAIN 679..725
FT /note="G-patch"
FT /evidence="ECO:0000259|PROSITE:PS50174"
FT DOMAIN 1166..1289
FT /note="Integrase catalytic"
FT /evidence="ECO:0000259|PROSITE:PS50994"
FT REGION 40..62
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 135..157
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 261..280
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 135..151
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1289 AA; 144333 MW; 5FE55269CC818D0E CRC64;
MVFPASSPHA PAHTSEPLPF QALQPHISFS YPTLPPLNIP IPEPGMPTQA IPIAPPTNFL
PETGTEQEQR LKKLEEIIRA PQSGDSRLDA GDGDWTADIP TWADLSSKFI DQYRYCAETP
PTLLELSTME MTDDQXGRTS QANSSTSIGT AYAPPPMHYQ QQLPAQQVYY SGPPASIPSI
TRPHHRPLRR MPHLRCIINN SQRSKFTIPA RRLPFRRRSR SNTPIIMPLF LLRFNKVGPR
LRELLSRCNG LRPRRTNRAS RHKRGVNSSH PCRLRSPTYI GNSSQMIDDK QLTFNAVKPP
NVQSNPLPDH GSSSGPSINM IDVCAIGEYE TGQEAPAPFV IEYVPAETGV GYAGFDATPT
PFVIEVPARE PYQDSKVPWT YEGSVGNLER QFSVMGVTRS GRVYENPEAA NKGKAPAAAL
GIALEATPIP QKKVTEEEAE AFMKIIKASE YKVVEQMGKS PAHISLLALL LGSKPHREGL
LKVLTAAQVP KEAAPDLIAE TVGPIFSNNI SFSDDDLPPE GDRWPNLLHN ISFSDDELPP
EGYAHSRALH IVCKCNNFVV GRVMIDNGSA LNVYPVSTMK QMNVDLNRIR PSKTAVRAFD
GSRREVNGEI NLLIEVGPCS FSVTFQVLDI PNGFSLLLGR PWIHSAGAVP STLHQKLKFI
VEERLVTVKD YGKVGPFRVD RMVWKILLRH NYIPGSGLGA HGQGINHPIE IEEYKNRRGL
GFRPSCHEII EARRGKHLHR LAAHYGKINR GIPIPPLSYF FPSPPHIVGG TLDDPFAGHA
LRSQKCRGNL PTGHGHTLXV DYRDLNKASP KDNFPLPHID VLVDNTACHN QFSFMDGFLG
YNQIRMAEED KIKTTFITMC GTFYYKVMPF GLKNAGATYQ RAMVTLFHDM MHKEIEVYVD
DMIANERGIK VDPDKVKAIR ELPLPSTVRE VRSFLGRLNY IARFIANLSD KCQPLFRLLR
KNAAIEWDDD CQKAFDDIKT YLVQPPVLVR PTPGRPLVLY LTVRRQSLGC MLGQEDEFTR
AEHAIYYLSK KFTEGESNYP EIERMCCALV WVMQRLRQYT LYHAIRLLSK ADPLKYLLGS
PFSMRNIAKW RCQLTEYDIE YVPRSSVKGQ AIAEHLAEFP IEDDTPIDSD FPNEGILQVD
EEEDGTAWKM YFDGAVNSTG SGIGAVLISP DGRYYPIAAK VDFPCTNNVA EYEACILGLQ
AAIDFKAITL ASVTANAVAR FLKRDIIARY GVPETIITDN AKNLNNRIID ELCERFKIHH
RNSTPYRPQM NGAVEAVNKN IKKIXMPRT
//
