ID A0A2I0J747_PUNGR Unreviewed; 620 AA.
AC A0A2I0J747;
DT 28-FEB-2018, integrated into UniProtKB/TrEMBL.
DT 28-FEB-2018, sequence version 1.
DT 24-JAN-2024, entry version 16.
DE RecName: Full=Cleavage and polyadenylation specificity factor subunit 2 {ECO:0000256|RuleBase:RU365006};
DE AltName: Full=Cleavage and polyadenylation specificity factor 100 kDa subunit {ECO:0000256|RuleBase:RU365006};
DE Flags: Fragment;
GN ORFNames=CRG98_027483 {ECO:0000313|EMBL:PKI52067.1};
OS Punica granatum (Pomegranate).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Myrtales; Lythraceae; Punica.
OX NCBI_TaxID=22663 {ECO:0000313|EMBL:PKI52067.1, ECO:0000313|Proteomes:UP000233551};
RN [1] {ECO:0000313|EMBL:PKI52067.1, ECO:0000313|Proteomes:UP000233551}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. AG2017 {ECO:0000313|Proteomes:UP000233551};
RC TISSUE=Leaf {ECO:0000313|EMBL:PKI52067.1};
RA Akparov Z., Amiraslanov A., Hajiyeva S., Abbasov M., Kaur K., Hamwieh A.,
RA Solovyev V., Salamov A., Braich B., Kosarev P., Mahmoud A., Hajiyev E.,
RA Babayeva S., Izzatullayeva V., Mammadov A., Mammadov A., Sharifova S.,
RA Ojaghi J., Eynullazada K., Bayramov B., Abdulazimova A., Shahmuradov I.;
RT "De-novo sequencing of pomegranate (Punica granatum L.) genome.";
RL Submitted (NOV-2017) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123,
CC ECO:0000256|RuleBase:RU365006}.
CC -!- SIMILARITY: Belongs to the metallo-beta-lactamase superfamily. RNA-
CC metabolizing metallo-beta-lactamase-like family. CPSF2/YSH1 subfamily.
CC {ECO:0000256|RuleBase:RU365006}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PKI52067.1}.
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DR EMBL; PGOL01001975; PKI52067.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2I0J747; -.
DR STRING; 22663.A0A2I0J747; -.
DR Proteomes; UP000233551; Unassembled WGS sequence.
DR GO; GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; IEA:InterPro.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0006378; P:mRNA polyadenylation; IEA:InterPro.
DR CDD; cd16293; CPSF2-like_MBL-fold; 1.
DR Gene3D; 3.60.15.10; Ribonuclease Z/Hydroxyacylglutathione hydrolase-like; 1.
DR InterPro; IPR022712; Beta_Casp.
DR InterPro; IPR027075; CPSF2.
DR InterPro; IPR035639; CPSF2_MBL.
DR InterPro; IPR001279; Metallo-B-lactamas.
DR InterPro; IPR036866; RibonucZ/Hydroxyglut_hydro.
DR InterPro; IPR011108; RMMBL.
DR PANTHER; PTHR45922; CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 2; 1.
DR PANTHER; PTHR45922:SF1; CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 2; 1.
DR Pfam; PF10996; Beta-Casp; 1.
DR Pfam; PF16661; Lactamase_B_6; 1.
DR Pfam; PF07521; RMMBL; 1.
DR SMART; SM01027; Beta-Casp; 1.
DR SMART; SM00849; Lactamase_B; 1.
DR SUPFAM; SSF56281; Metallo-hydrolase/oxidoreductase; 1.
PE 3: Inferred from homology;
KW mRNA processing {ECO:0000256|ARBA:ARBA00022664,
KW ECO:0000256|RuleBase:RU365006};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242, ECO:0000256|RuleBase:RU365006};
KW Reference proteome {ECO:0000313|Proteomes:UP000233551};
KW RNA-binding {ECO:0000256|RuleBase:RU365006}.
FT DOMAIN 17..222
FT /note="Metallo-beta-lactamase"
FT /evidence="ECO:0000259|SMART:SM00849"
FT DOMAIN 242..361
FT /note="Beta-Casp"
FT /evidence="ECO:0000259|SMART:SM01027"
FT NON_TER 620
FT /evidence="ECO:0000313|EMBL:PKI52067.1"
SQ SEQUENCE 620 AA; 68881 MW; 712565E15010687E CRC64;
MGTSVQVTPL CGVYNENPLS YLISIDGFNF LVDCGWNDHF DTSLLQPLSR VASNIDAVLL
SHSDTLHLGA LPYAMKQLGL SAPVYATEPV FRLGLLTMYD QYLSRKQVSE FDLFTLDDVD
SAFQNVTRLT YSQNHHLSGK GEGIVISPHV AGHLLGGTIW KITKDGEDVI YAVDFNHRKE
RHLNGTALES FVRPAVLVTD AYNALNTQLP TKQRERAFID ALRRTLEAGG NVLIPVDTSG
RVLELLLILE ESPLSYPIYF LTYVSSSTIE YVKSFLEWMS DSIAKSFEHT RDNAFLLKHI
TLLINKNELD NAPAGPKVVL ASMASLEAGF SHDIFVEWAT DPRNLVLFTE RGQFATLARM
LQADPPPKAV KVTMSKRVPL VGDELLAYEE EQNRIKEEAL KSSIIKEEES KAIRASDNAS
DPMVIDTGNT NISSEATGSH CGKYRDILID GFVPPPTSVA PMFPFYENTS DWDDFGEVIN
PDDYVIKDED MDQGAMHLGS NLDGKLDEAS ANLMLDTRPS KVVSNELTVQ VKCSLTYMDF
EGRADSRAIK SILAHVAPLK LVLVRGSAEA TEHLKQHCLK HVCPHVYAPQ IEETIDVTSD
MCAYKVQLSE KLMSNVLFKK
//
