GenomeNet

Database: UniProt
Entry: A0A2I0LJP1_COLLI
LinkDB: A0A2I0LJP1_COLLI
Original site: A0A2I0LJP1_COLLI 
ID   A0A2I0LJP1_COLLI        Unreviewed;      1343 AA.
AC   A0A2I0LJP1;
DT   28-FEB-2018, integrated into UniProtKB/TrEMBL.
DT   28-FEB-2018, sequence version 1.
DT   24-JAN-2024, entry version 19.
DE   RecName: Full=Strawberry notch homolog 2 {ECO:0008006|Google:ProtNLM};
GN   ORFNames=A306_00014287 {ECO:0000313|EMBL:PKK17652.1};
OS   Columba livia (Rock dove).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC   Coelurosauria; Aves; Neognathae; Columbiformes; Columbidae; Columba.
OX   NCBI_TaxID=8932 {ECO:0000313|EMBL:PKK17652.1, ECO:0000313|Proteomes:UP000053872};
RN   [1] {ECO:0000313|EMBL:PKK17652.1, ECO:0000313|Proteomes:UP000053872}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   TISSUE=Blood {ECO:0000313|EMBL:PKK17652.1};
RX   PubMed=23371554; DOI=10.1126/science.1230422;
RA   Shapiro M.D., Kronenberg Z., Li C., Domyan E.T., Pan H., Campbell M.,
RA   Tan H., Huff C.D., Hu H., Vickrey A.I., Nielsen S.C., Stringham S.A.,
RA   Hu H., Willerslev E., Gilbert M.T., Yandell M., Zhang G., Wang J.;
RT   "Genomic diversity and evolution of the head crest in the rock pigeon.";
RL   Science 339:1063-1067(2013).
CC   -!- SIMILARITY: Belongs to the SBNO family.
CC       {ECO:0000256|ARBA:ARBA00006992}.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:PKK17652.1}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; AKCR02000286; PKK17652.1; -; Genomic_DNA.
DR   STRING; 8932.A0A2I0LJP1; -.
DR   InParanoid; A0A2I0LJP1; -.
DR   Proteomes; UP000053872; Unassembled WGS sequence.
DR   GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR   Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR   InterPro; IPR027417; P-loop_NTPase.
DR   InterPro; IPR026937; SBNO_Helicase_C_dom.
DR   InterPro; IPR026741; SNO.
DR   InterPro; IPR039187; SNO_AAA.
DR   PANTHER; PTHR12706:SF5; PROTEIN STRAWBERRY NOTCH HOMOLOG 2; 1.
DR   PANTHER; PTHR12706; STRAWBERRY NOTCH-RELATED; 1.
DR   Pfam; PF13872; AAA_34; 1.
DR   Pfam; PF13871; Helicase_C_4; 1.
DR   SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
PE   3: Inferred from homology;
KW   Reference proteome {ECO:0000313|Proteomes:UP000053872}.
FT   DOMAIN          139..432
FT                   /note="Strawberry notch AAA"
FT                   /evidence="ECO:0000259|Pfam:PF13872"
FT   DOMAIN          664..942
FT                   /note="Strawberry notch helicase C"
FT                   /evidence="ECO:0000259|Pfam:PF13871"
FT   REGION          82..132
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          1186..1212
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          1261..1296
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        82..101
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        106..122
FT                   /note="Acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   1343 AA;  150942 MW;  322EA5F900A46B64 CRC64;
     MSQMQFWLKF PSLYKDSSYL DELSNNNSLF SSPADSLSDI ADPKDFLPAD SLNHVPTLWD
     VNTPQQNQIE LFSPSRSFTG LKSSNDHVPA VPNTPLLISY QSQAPAEEED EGEEEETEEL
     GQTETYAEYI PSKSKIGKHH PDLVVETSTL SSVPPPDVTY SLALPRSVAD RGSLSALQLE
     AIIYACQQHE VLLPNGQRAG FLIGDGAGVG KGRTVAGIIF ENYLKGRKKA LWFSVSNDLK
     YDAERDLKDI EASHIPVHAL NKIKYGDTAT SEGVLFATYS ALIGESQAGG QHRTRLKQIL
     DWCSENFDGV IVFDECHKAK NASSTKMGKA VLDLQNKLPR ARVVYASATG ASEPKNMIYM
     SRLGIWGEGT PFKAFDEFLH AIEKRGVGAM EIVAMDMKVS GMYIARQLSF TGVTFRIEEI
     PLDQQYKIVY DKAAKLWAEA LMVFQQAADW IGLESRKSLW GQFWSAHQRF FKYLCIAAKV
     RRLVELAKEE LAKDKCIVIG LQSTGEARTR EVLDENDGHL NCFVSAAEGV FLSLIQKHFP
     STKRKREKGT GIKRKRKPRG RCAKALKGLC DPAGVIKISD DSSTDSDMGL DSDFNSSPES
     MFETDDVIFV EHTYNGFVAE DRSNFHMLPS QKEMHGPREL EHVEKLKQDL LAKVKALGKE
     LPLNTLDELI NHFGGPDHVA EMTGRKGRVV CRPDGSVMFE SRAEQGLSID HVNLKEKERF
     MNGEKLVAII SEASSSGISL QADRRVKNQK RRVHMTLELP WSADRAIQQF GRTHRSNQVS
     APEYVFLISE LAGERRFASI VAKRLESLGA LTHGDRRATE SRDLSKYNFE NKYGAKALDR
     VLSTILSQTE NRVPVPKSYD RGEAAFFQEM KQGLISVGIC CHHMKYGTVS VEKDCSITKF
     LNRILGLEVD KQNMLFQYFS DTFDYLIEKD KKEGKYDMGI LDLAPGVDEI YEESKEVFLT
     PGHPQDGQVV FYKISVDRGL KWEEAYEKSL KLTGSFDGFY LSNKMRGCKH TCLLAEQSRG
     KNFILYKPNI GKQSQPESLD SLQKKYRRVL PEEAKEHWES SYLFSLTHCN HAIXXRSCRL
     RQEGKECFQG TRLRHYYMLC GALLRVWSRI ASIMADVTNS SYLQIVRLKT KEKKKQVGIK
     IPESCVRKVR EELKQMDENV KRKHNQLVQE PSPQFSLPLH VLPQPLDLTQ TGPGIPQPLD
     LTQTGPGIPL PNLRQDEILD LTYSPPSNSI PDVVMNPEPG ALCFPLEPVL QPHQQHRLPF
     GLSHPPVLEG SAAASSSLHE HLPLPPPAPL QPPQEDFVQQ DGNINFREIL EDMLRPFNGG
     PQENGLPQER QSVIQFSGPF SDF
//
DBGET integrated database retrieval system