ID A0A2I0LJP1_COLLI Unreviewed; 1343 AA.
AC A0A2I0LJP1;
DT 28-FEB-2018, integrated into UniProtKB/TrEMBL.
DT 28-FEB-2018, sequence version 1.
DT 24-JAN-2024, entry version 19.
DE RecName: Full=Strawberry notch homolog 2 {ECO:0008006|Google:ProtNLM};
GN ORFNames=A306_00014287 {ECO:0000313|EMBL:PKK17652.1};
OS Columba livia (Rock dove).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC Coelurosauria; Aves; Neognathae; Columbiformes; Columbidae; Columba.
OX NCBI_TaxID=8932 {ECO:0000313|EMBL:PKK17652.1, ECO:0000313|Proteomes:UP000053872};
RN [1] {ECO:0000313|EMBL:PKK17652.1, ECO:0000313|Proteomes:UP000053872}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC TISSUE=Blood {ECO:0000313|EMBL:PKK17652.1};
RX PubMed=23371554; DOI=10.1126/science.1230422;
RA Shapiro M.D., Kronenberg Z., Li C., Domyan E.T., Pan H., Campbell M.,
RA Tan H., Huff C.D., Hu H., Vickrey A.I., Nielsen S.C., Stringham S.A.,
RA Hu H., Willerslev E., Gilbert M.T., Yandell M., Zhang G., Wang J.;
RT "Genomic diversity and evolution of the head crest in the rock pigeon.";
RL Science 339:1063-1067(2013).
CC -!- SIMILARITY: Belongs to the SBNO family.
CC {ECO:0000256|ARBA:ARBA00006992}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PKK17652.1}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; AKCR02000286; PKK17652.1; -; Genomic_DNA.
DR STRING; 8932.A0A2I0LJP1; -.
DR InParanoid; A0A2I0LJP1; -.
DR Proteomes; UP000053872; Unassembled WGS sequence.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR026937; SBNO_Helicase_C_dom.
DR InterPro; IPR026741; SNO.
DR InterPro; IPR039187; SNO_AAA.
DR PANTHER; PTHR12706:SF5; PROTEIN STRAWBERRY NOTCH HOMOLOG 2; 1.
DR PANTHER; PTHR12706; STRAWBERRY NOTCH-RELATED; 1.
DR Pfam; PF13872; AAA_34; 1.
DR Pfam; PF13871; Helicase_C_4; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000053872}.
FT DOMAIN 139..432
FT /note="Strawberry notch AAA"
FT /evidence="ECO:0000259|Pfam:PF13872"
FT DOMAIN 664..942
FT /note="Strawberry notch helicase C"
FT /evidence="ECO:0000259|Pfam:PF13871"
FT REGION 82..132
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1186..1212
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1261..1296
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 82..101
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 106..122
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1343 AA; 150942 MW; 322EA5F900A46B64 CRC64;
MSQMQFWLKF PSLYKDSSYL DELSNNNSLF SSPADSLSDI ADPKDFLPAD SLNHVPTLWD
VNTPQQNQIE LFSPSRSFTG LKSSNDHVPA VPNTPLLISY QSQAPAEEED EGEEEETEEL
GQTETYAEYI PSKSKIGKHH PDLVVETSTL SSVPPPDVTY SLALPRSVAD RGSLSALQLE
AIIYACQQHE VLLPNGQRAG FLIGDGAGVG KGRTVAGIIF ENYLKGRKKA LWFSVSNDLK
YDAERDLKDI EASHIPVHAL NKIKYGDTAT SEGVLFATYS ALIGESQAGG QHRTRLKQIL
DWCSENFDGV IVFDECHKAK NASSTKMGKA VLDLQNKLPR ARVVYASATG ASEPKNMIYM
SRLGIWGEGT PFKAFDEFLH AIEKRGVGAM EIVAMDMKVS GMYIARQLSF TGVTFRIEEI
PLDQQYKIVY DKAAKLWAEA LMVFQQAADW IGLESRKSLW GQFWSAHQRF FKYLCIAAKV
RRLVELAKEE LAKDKCIVIG LQSTGEARTR EVLDENDGHL NCFVSAAEGV FLSLIQKHFP
STKRKREKGT GIKRKRKPRG RCAKALKGLC DPAGVIKISD DSSTDSDMGL DSDFNSSPES
MFETDDVIFV EHTYNGFVAE DRSNFHMLPS QKEMHGPREL EHVEKLKQDL LAKVKALGKE
LPLNTLDELI NHFGGPDHVA EMTGRKGRVV CRPDGSVMFE SRAEQGLSID HVNLKEKERF
MNGEKLVAII SEASSSGISL QADRRVKNQK RRVHMTLELP WSADRAIQQF GRTHRSNQVS
APEYVFLISE LAGERRFASI VAKRLESLGA LTHGDRRATE SRDLSKYNFE NKYGAKALDR
VLSTILSQTE NRVPVPKSYD RGEAAFFQEM KQGLISVGIC CHHMKYGTVS VEKDCSITKF
LNRILGLEVD KQNMLFQYFS DTFDYLIEKD KKEGKYDMGI LDLAPGVDEI YEESKEVFLT
PGHPQDGQVV FYKISVDRGL KWEEAYEKSL KLTGSFDGFY LSNKMRGCKH TCLLAEQSRG
KNFILYKPNI GKQSQPESLD SLQKKYRRVL PEEAKEHWES SYLFSLTHCN HAIXXRSCRL
RQEGKECFQG TRLRHYYMLC GALLRVWSRI ASIMADVTNS SYLQIVRLKT KEKKKQVGIK
IPESCVRKVR EELKQMDENV KRKHNQLVQE PSPQFSLPLH VLPQPLDLTQ TGPGIPQPLD
LTQTGPGIPL PNLRQDEILD LTYSPPSNSI PDVVMNPEPG ALCFPLEPVL QPHQQHRLPF
GLSHPPVLEG SAAASSSLHE HLPLPPPAPL QPPQEDFVQQ DGNINFREIL EDMLRPFNGG
PQENGLPQER QSVIQFSGPF SDF
//