ID A0A2I0LZJ5_COLLI Unreviewed; 620 AA.
AC A0A2I0LZJ5;
DT 28-FEB-2018, integrated into UniProtKB/TrEMBL.
DT 28-FEB-2018, sequence version 1.
DT 24-JAN-2024, entry version 26.
DE SubName: Full=Sushi domain containing 5 {ECO:0000313|EMBL:PKK22856.1};
GN Name=SUSD5 {ECO:0000313|EMBL:PKK22856.1};
GN ORFNames=A306_00011351 {ECO:0000313|EMBL:PKK22856.1};
OS Columba livia (Rock dove).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC Coelurosauria; Aves; Neognathae; Columbiformes; Columbidae; Columba.
OX NCBI_TaxID=8932 {ECO:0000313|EMBL:PKK22856.1, ECO:0000313|Proteomes:UP000053872};
RN [1] {ECO:0000313|EMBL:PKK22856.1, ECO:0000313|Proteomes:UP000053872}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC TISSUE=Blood {ECO:0000313|EMBL:PKK22856.1};
RX PubMed=23371554; DOI=10.1126/science.1230422;
RA Shapiro M.D., Kronenberg Z., Li C., Domyan E.T., Pan H., Campbell M.,
RA Tan H., Huff C.D., Hu H., Vickrey A.I., Nielsen S.C., Stringham S.A.,
RA Hu H., Willerslev E., Gilbert M.T., Yandell M., Zhang G., Wang J.;
RT "Genomic diversity and evolution of the head crest in the rock pigeon.";
RL Science 339:1063-1067(2013).
CC -!- CAUTION: Lacks conserved residue(s) required for the propagation of
CC feature annotation. {ECO:0000256|PROSITE-ProRule:PRU00302}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PKK22856.1}.
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DR EMBL; AKCR02000057; PKK22856.1; -; Genomic_DNA.
DR RefSeq; XP_005502925.1; XM_005502868.2.
DR AlphaFoldDB; A0A2I0LZJ5; -.
DR STRING; 8932.A0A2I0LZJ5; -.
DR GeneID; 102090648; -.
DR KEGG; clv:102090648; -.
DR CTD; 26032; -.
DR InParanoid; A0A2I0LZJ5; -.
DR OrthoDB; 5351507at2759; -.
DR Proteomes; UP000053872; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0005540; F:hyaluronic acid binding; IEA:InterPro.
DR GO; GO:0007155; P:cell adhesion; IEA:InterPro.
DR CDD; cd00033; CCP; 1.
DR Gene3D; 2.10.70.10; Complement Module, domain 1; 1.
DR Gene3D; 3.10.100.10; Mannose-Binding Protein A, subunit A; 1.
DR InterPro; IPR016186; C-type_lectin-like/link_sf.
DR InterPro; IPR016187; CTDL_fold.
DR InterPro; IPR000538; Link_dom.
DR InterPro; IPR035976; Sushi/SCR/CCP_sf.
DR InterPro; IPR000436; Sushi_SCR_CCP_dom.
DR PANTHER; PTHR32493; SUSHI DOMAIN-CONTAINING PROTEIN 5; 1.
DR PANTHER; PTHR32493:SF0; SUSHI DOMAIN-CONTAINING PROTEIN 5; 1.
DR Pfam; PF00084; Sushi; 1.
DR Pfam; PF00193; Xlink; 1.
DR SMART; SM00032; CCP; 1.
DR SMART; SM00445; LINK; 1.
DR SUPFAM; SSF56436; C-type lectin-like; 1.
DR SUPFAM; SSF57535; Complement control module/SCR domain; 1.
DR PROSITE; PS50963; LINK_2; 1.
DR PROSITE; PS50923; SUSHI; 1.
PE 4: Predicted;
KW Disulfide bond {ECO:0000256|ARBA:ARBA00023157};
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000053872};
KW Sushi {ECO:0000256|PROSITE-ProRule:PRU00302};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 561..584
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 33..128
FT /note="Link"
FT /evidence="ECO:0000259|PROSITE:PS50963"
FT DOMAIN 132..193
FT /note="Sushi"
FT /evidence="ECO:0000259|PROSITE:PS50923"
FT REGION 224..269
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 284..303
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 531..552
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 237..269
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 286..302
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 620 AA; 67812 MW; 35D90BB6567A28A2 CRC64;
MASASQRSSL TFLQGVGSVF FILQIISVQA DGKVFALESK NNSQGLDLAE AEKACVDLSA
HLATAEELKR AVLDCSFSGC TTGWLAGGSS GTIICRKTGS KQQSVKAIDV KIETDRFVND
QYDAFCVKDE DKPCGDPPSF PHTILHGHTG FEMGDELLYV CAQGYVMGNK ETAFTLLCDS
CGEWYGQVQA CVKDETEAHI DYEDNFPDDR SIPVVENEHV NGKEEIEQEQ QHLSFGKSSE
EGRTGSTEVV TQDTDTSEKG SRAPTESPVS LLSQKNLFWF PSEALSEPES EKDADDSTKA
QFSEGDNHIG VKTAYDEPAA KMFYDSEDFP IGPILTTNDT KAEIDAVAIT DESWLDGYPV
TQEVVEDEEE EGDKVDGSMG TEDDIVLTTD QPNHVEVRKS GNGSPAPEEG LTQIVAATTR
IDDEGVKEIP VPLTSVSVLE NLSMSRSYDD ATWDHLTTSP ETVTQETSTM MLFDVTSLKT
PMSETSVMVS PSDHTLYAEP KETTAYPAQV ATTAPAPDII TDTSSQELAE QENLTQGLGE
KPIPTSEPCE GEDCPKSSKG AIIAVIVILL CLLVVAAVLA VWFFKKRQQK NSVYKLNGRC
QPRHHCYHHY HHQHIEMQKV
//
