ID A0A2I0M7N8_COLLI Unreviewed; 361 AA.
AC A0A2I0M7N8;
DT 28-FEB-2018, integrated into UniProtKB/TrEMBL.
DT 28-FEB-2018, sequence version 1.
DT 24-JAN-2024, entry version 15.
DE SubName: Full=Chondroadherin, transcript variant X1 {ECO:0000313|EMBL:PKK25696.1};
DE SubName: Full=Chondroadherin, transcript variant X2 {ECO:0000313|EMBL:PKK25697.1};
GN Name=CHAD {ECO:0000313|EMBL:PKK25696.1};
GN ORFNames=A306_00006367 {ECO:0000313|EMBL:PKK25696.1};
OS Columba livia (Rock dove).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC Coelurosauria; Aves; Neognathae; Columbiformes; Columbidae; Columba.
OX NCBI_TaxID=8932 {ECO:0000313|EMBL:PKK25696.1, ECO:0000313|Proteomes:UP000053872};
RN [1] {ECO:0000313|EMBL:PKK25696.1, ECO:0000313|Proteomes:UP000053872}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC TISSUE=Blood {ECO:0000313|EMBL:PKK25696.1};
RX PubMed=23371554; DOI=10.1126/science.1230422;
RA Shapiro M.D., Kronenberg Z., Li C., Domyan E.T., Pan H., Campbell M.,
RA Tan H., Huff C.D., Hu H., Vickrey A.I., Nielsen S.C., Stringham S.A.,
RA Hu H., Willerslev E., Gilbert M.T., Yandell M., Zhang G., Wang J.;
RT "Genomic diversity and evolution of the head crest in the rock pigeon.";
RL Science 339:1063-1067(2013).
RN [2] {ECO:0000313|EMBL:PKK25696.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Blood {ECO:0000313|EMBL:PKK25696.1};
RA Holt C., Campbell M., Edelman N., Keays D., Kapusta A., Domyan E., Suh A.,
RA Carleton J., Warren W., Yandell M., Gilbert M.T., Shapiro M.D.;
RT "Improved genome assembly and annotation for the rock pigeon (Columba
RT livia).";
RL Submitted (AUG-2017) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PKK25696.1}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; AKCR02000032; PKK25696.1; -; Genomic_DNA.
DR EMBL; AKCR02000032; PKK25697.1; -; Genomic_DNA.
DR RefSeq; XP_005503154.1; XM_005503097.1.
DR RefSeq; XP_005503155.1; XM_005503098.1.
DR AlphaFoldDB; A0A2I0M7N8; -.
DR STRING; 8932.A0A2I0M7N8; -.
DR GeneID; 102087447; -.
DR KEGG; clv:102087447; -.
DR CTD; 1101; -.
DR InParanoid; A0A2I0M7N8; -.
DR OrthoDB; 3851278at2759; -.
DR Proteomes; UP000053872; Unassembled WGS sequence.
DR Gene3D; 3.80.10.10; Ribonuclease Inhibitor; 1.
DR InterPro; IPR000483; Cys-rich_flank_reg_C.
DR InterPro; IPR001611; Leu-rich_rpt.
DR InterPro; IPR003591; Leu-rich_rpt_typical-subtyp.
DR InterPro; IPR032675; LRR_dom_sf.
DR InterPro; IPR000372; LRRNT.
DR PANTHER; PTHR24373:SF277; CHONDROADHERIN; 1.
DR PANTHER; PTHR24373; SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN; 1.
DR Pfam; PF13855; LRR_8; 3.
DR Pfam; PF01462; LRRNT; 1.
DR SMART; SM00369; LRR_TYP; 8.
DR SMART; SM00082; LRRCT; 1.
DR SMART; SM00013; LRRNT; 1.
DR SUPFAM; SSF52058; L domain-like; 1.
DR PROSITE; PS51450; LRR; 1.
DR PROSITE; PS51257; PROKAR_LIPOPROTEIN; 1.
PE 4: Predicted;
KW Leucine-rich repeat {ECO:0000256|ARBA:ARBA00022614};
KW Reference proteome {ECO:0000313|Proteomes:UP000053872};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Signal {ECO:0000256|ARBA:ARBA00022729, ECO:0000256|SAM:SignalP}.
FT SIGNAL 1..23
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 24..361
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5014080419"
FT DOMAIN 23..57
FT /note="LRRNT"
FT /evidence="ECO:0000259|SMART:SM00013"
FT DOMAIN 302..349
FT /note="LRRCT"
FT /evidence="ECO:0000259|SMART:SM00082"
SQ SEQUENCE 361 AA; 40681 MW; 6536EF7F360279F5 CRC64;
MNRSGFFLSV LSLLVCLTSI VQACPPSCHC HGGDLQHVIC DNAGLKKIPK VPEQTRLLNL
QKNNFPVLPT NGFRDMKKLV SLHLQSSRIK EISTGAFRGL KSLVYLYLTD NQISVIKAGA
FDDLSDLTYL YLDKNKIPDL PKGLLSPLVN LFILHLGSNK IRELKPGAFN GAKDLRWLFL
SDNSLTNLLP GALEDVENLA VLHLDKNQLS NYPVNAMSKL RVLEELKLSH NPIEVIPDSA
FQSFGRYLQT LHLDNMKLKK FSDNAFAGVT ALKTAHLENN RLTQLPRNFP FDKMETLTLS
RNAWHCNCQL AHLRKWLKGN RTRTDETCST PAQYRGQSIR DTAALRTCKL PTKRSRKGSR
H
//
