ID A0A2I0VQB7_9ASPA Unreviewed; 990 AA.
AC A0A2I0VQB7;
DT 28-FEB-2018, integrated into UniProtKB/TrEMBL.
DT 28-FEB-2018, sequence version 1.
DT 27-MAR-2024, entry version 24.
DE RecName: Full=Ribonuclease {ECO:0000256|PIRNR:PIRNR017179};
GN ORFNames=MA16_Dca024146 {ECO:0000313|EMBL:PKU65597.1};
OS Dendrobium catenatum.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Asparagales; Orchidaceae;
OC Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium.
OX NCBI_TaxID=906689 {ECO:0000313|EMBL:PKU65597.1, ECO:0000313|Proteomes:UP000233837};
RN [1] {ECO:0000313|EMBL:PKU65597.1, ECO:0000313|Proteomes:UP000233837}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC TISSUE=The whole plant {ECO:0000313|EMBL:PKU65597.1};
RX PubMed=26754549; DOI=10.1038/srep19029;
RA Zhang G.Q., Xu Q., Bian C., Tsai W.C., Yeh C.M., Liu K.W., Yoshida K.,
RA Zhang L.S., Chang S.B., Chen F., Shi Y., Su Y.Y., Zhang Y.Q., Chen L.J.,
RA Yin Y., Lin M., Huang H., Deng H., Wang Z.W., Zhu S.L., Zhao X., Deng C.,
RA Niu S.C., Huang J., Wang M., Liu G.H., Yang H.J., Xiao X.J., Hsiao Y.Y.,
RA Wu W.L., Chen Y.Y., Mitsuda N., Ohme-Takagi M., Luo Y.B., Van de Peer Y.,
RA Liu Z.J.;
RT "The Dendrobium catenatum Lindl. genome sequence provides insights into
RT polysaccharide synthase, floral development and adaptive evolution.";
RL Sci. Rep. 6:19029-19029(2016).
RN [2] {ECO:0000313|EMBL:PKU65597.1, ECO:0000313|Proteomes:UP000233837}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC TISSUE=The whole plant {ECO:0000313|EMBL:PKU65597.1};
RX PubMed=28902843; DOI=10.1038/nature23897;
RA Zhang G.Q., Liu K.W., Li Z., Lohaus R., Hsiao Y.Y., Niu S.C., Wang J.Y.,
RA Lin Y.C., Xu Q., Chen L.J., Yoshida K., Fujiwara S., Wang Z.W., Zhang Y.Q.,
RA Mitsuda N., Wang M., Liu G.H., Pecoraro L., Huang H.X., Xiao X.J., Lin M.,
RA Wu X.Y., Wu W.L., Chen Y.Y., Chang S.B., Sakamoto S., Ohme-Takagi M.,
RA Yagi M., Zeng S.J., Shen C.Y., Yeh C.M., Luo Y.B., Tsai W.C.,
RA Van de Peer Y., Liu Z.J.;
RT "The Apostasia genome and the evolution of orchids.";
RL Nature 549:379-383(2017).
CC -!- FUNCTION: Cytoprotective ribonuclease (RNase) required for resistance
CC to abiotic stresses, acting as a positive regulator of mRNA decapping
CC during stress. {ECO:0000256|PIRNR:PIRNR017179}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|PIRNR:PIRNR017179}.
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DR EMBL; KZ503328; PKU65597.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2I0VQB7; -.
DR STRING; 906689.A0A2I0VQB7; -.
DR OrthoDB; 375531at2759; -.
DR Proteomes; UP000233837; Unassembled WGS sequence.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0016442; C:RISC complex; IEA:UniProtKB-UniRule.
DR GO; GO:0004518; F:nuclease activity; IEA:UniProtKB-UniRule.
DR GO; GO:0031047; P:regulatory ncRNA-mediated gene silencing; IEA:InterPro.
DR CDD; cd20443; Tudor_AtTudor1-like; 1.
DR Gene3D; 2.30.30.140; -; 1.
DR Gene3D; 2.40.50.90; -; 5.
DR InterPro; IPR016685; Silence_cplx_Nase-comp_TudorSN.
DR InterPro; IPR035437; SNase_OB-fold_sf.
DR InterPro; IPR016071; Staphylococal_nuclease_OB-fold.
DR InterPro; IPR002999; Tudor.
DR InterPro; IPR047395; Tudor_AtTudor1-like.
DR PANTHER; PTHR12302; EBNA2 BINDING PROTEIN P100; 1.
DR PANTHER; PTHR12302:SF2; STAPHYLOCOCCAL NUCLEASE DOMAIN-CONTAINING PROTEIN 1; 1.
DR Pfam; PF00565; SNase; 3.
DR Pfam; PF00567; TUDOR; 1.
DR PIRSF; PIRSF017179; RISC-Tudor-SN; 1.
DR SMART; SM00318; SNc; 4.
DR SMART; SM00333; TUDOR; 1.
DR SUPFAM; SSF50199; Staphylococcal nuclease; 5.
DR SUPFAM; SSF63748; Tudor/PWWP/MBT; 1.
DR PROSITE; PS50830; TNASE_3; 4.
DR PROSITE; PS50304; TUDOR; 1.
PE 4: Predicted;
KW Cytoplasm {ECO:0000256|PIRNR:PIRNR017179};
KW Reference proteome {ECO:0000313|Proteomes:UP000233837};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT DOMAIN 9..148
FT /note="TNase-like"
FT /evidence="ECO:0000259|PROSITE:PS50830"
FT DOMAIN 183..362
FT /note="TNase-like"
FT /evidence="ECO:0000259|PROSITE:PS50830"
FT DOMAIN 376..557
FT /note="TNase-like"
FT /evidence="ECO:0000259|PROSITE:PS50830"
FT DOMAIN 587..714
FT /note="TNase-like"
FT /evidence="ECO:0000259|PROSITE:PS50830"
FT DOMAIN 780..845
FT /note="Tudor"
FT /evidence="ECO:0000259|PROSITE:PS50304"
SQ SEQUENCE 990 AA; 108942 MW; 2CCBEBA94790D3F0 CRC64;
MATAPVASGW LRGRVKAVPS GDTLVIMGST KAEIPPEKTI TLSHVITPRL ARRGTIDEPF
AWDSREFLRK LCIGKEVVFR VDYSVANINR EFGTVFLAEK NVAHLVVSQG WAKVKEQGPQ
KGEPSPGLAE LLHLEEQAKQ QELGRWSKVP GASEASIRNL PPSAIGDPSN LDAMELLAAN
KGKPMQAIVE QVRDGSTVRV YLLPEFLFVQ VFIAGIQAPS MGRRAVVEAT PVPEVIADDA
DGEVSSEIRT QPTSAQRLIS QASATEVLSD PFGREAKHFT EIRTLNRDVR IVLEGVDKFS
NLIGSLYYPD GDTAKDLALE LVQNGFAKYV EWSANMMEDE AKRRLKTADL QAKKDRLRIW
TNYVPPQTNS KAIHDQNFSG TVVEVVSGDC IIVADDSIPY GSPLAERRVN LSSIRCPKMG
NPRRDEKPAA YAREAREFLR TRLVGRPVKV AMEYSRKVSM ADGPYTTGVP GSADSRVMDF
GSVFLLSPSK ADGDDSTPAP PSVSGQAEGI NVAELVVSRG FGTVIRHRDF EERSNFYDAL
LAAESRAISG KKGIHSSKDS PVMHITDLTM ASVKKAKDFL PFLQRSRRLP AIVEYVLSGH
RFKLMIPKET CSIAFSLSGV RCPGRDEPFS NEAISLMRRK ILQRDVEIEV ETVDRTGTFL
GSLWESTTNM GAVLLGAGLA KLQTNFGADR IPDSQILAQA EQSAKLQKLK IWENYVEGQE
NTNGPSAESK EKEVLKVVVT EVLGGGQFYV QKVSDQNVAA IQNQLASLNL GEAPLLGSFN
PKKGDIVLAQ FSLDKSWNRA LIVNGPRGPV ESLNDNFEVF YIDYGNQETV PYSRLRHLDA
SVSSSPGLAQ LCKLAYIKVP ELDDDFGHEA AEYLSECTLN SSKEFRAMIE DRDTSGGKVK
GQGTGTVFIV TLVDVEAETS VNAAMLQEGL GRLERRRRWD KKERQAALDN LEEFQAKAKR
DRLKIWQYGD IQSDEDEDSA PAARKAGGRR
//
