ID A0A2I0WVM9_9ASPA Unreviewed; 334 AA.
AC A0A2I0WVM9;
DT 28-FEB-2018, integrated into UniProtKB/TrEMBL.
DT 28-FEB-2018, sequence version 1.
DT 28-JUN-2023, entry version 17.
DE SubName: Full=Zinc finger CCCH domain-containing protein 19 {ECO:0000313|EMBL:PKU79701.1};
GN Name=NERD {ECO:0000313|EMBL:PKU79701.1};
GN ORFNames=MA16_Dca010929 {ECO:0000313|EMBL:PKU79701.1};
OS Dendrobium catenatum.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Asparagales; Orchidaceae;
OC Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium.
OX NCBI_TaxID=906689 {ECO:0000313|EMBL:PKU79701.1, ECO:0000313|Proteomes:UP000233837};
RN [1] {ECO:0000313|EMBL:PKU79701.1, ECO:0000313|Proteomes:UP000233837}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC TISSUE=The whole plant {ECO:0000313|EMBL:PKU79701.1};
RX PubMed=26754549; DOI=10.1038/srep19029;
RA Zhang G.Q., Xu Q., Bian C., Tsai W.C., Yeh C.M., Liu K.W., Yoshida K.,
RA Zhang L.S., Chang S.B., Chen F., Shi Y., Su Y.Y., Zhang Y.Q., Chen L.J.,
RA Yin Y., Lin M., Huang H., Deng H., Wang Z.W., Zhu S.L., Zhao X., Deng C.,
RA Niu S.C., Huang J., Wang M., Liu G.H., Yang H.J., Xiao X.J., Hsiao Y.Y.,
RA Wu W.L., Chen Y.Y., Mitsuda N., Ohme-Takagi M., Luo Y.B., Van de Peer Y.,
RA Liu Z.J.;
RT "The Dendrobium catenatum Lindl. genome sequence provides insights into
RT polysaccharide synthase, floral development and adaptive evolution.";
RL Sci. Rep. 6:19029-19029(2016).
RN [2] {ECO:0000313|EMBL:PKU79701.1, ECO:0000313|Proteomes:UP000233837}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC TISSUE=The whole plant {ECO:0000313|EMBL:PKU79701.1};
RX PubMed=28902843; DOI=10.1038/nature23897;
RA Zhang G.Q., Liu K.W., Li Z., Lohaus R., Hsiao Y.Y., Niu S.C., Wang J.Y.,
RA Lin Y.C., Xu Q., Chen L.J., Yoshida K., Fujiwara S., Wang Z.W., Zhang Y.Q.,
RA Mitsuda N., Wang M., Liu G.H., Pecoraro L., Huang H.X., Xiao X.J., Lin M.,
RA Wu X.Y., Wu W.L., Chen Y.Y., Chang S.B., Sakamoto S., Ohme-Takagi M.,
RA Yagi M., Zeng S.J., Shen C.Y., Yeh C.M., Luo Y.B., Tsai W.C.,
RA Van de Peer Y., Liu Z.J.;
RT "The Apostasia genome and the evolution of orchids.";
RL Nature 549:379-383(2017).
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DR EMBL; KZ502422; PKU79701.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2I0WVM9; -.
DR STRING; 906689.A0A2I0WVM9; -.
DR OrthoDB; 72831at2759; -.
DR Proteomes; UP000233837; Unassembled WGS sequence.
DR CDD; cd10567; SWIB-MDM2_like; 2.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR Gene3D; 1.10.245.10; SWIB/MDM2 domain; 2.
DR InterPro; IPR014876; DEK_C.
DR InterPro; IPR019835; SWIB_domain.
DR InterPro; IPR036885; SWIB_MDM2_dom_sf.
DR InterPro; IPR003121; SWIB_MDM2_domain.
DR PANTHER; PTHR13844:SF53; LD45195P; 1.
DR PANTHER; PTHR13844; SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY D; 1.
DR Pfam; PF08766; DEK_C; 1.
DR Pfam; PF02201; SWIB; 2.
DR SMART; SM00151; SWIB; 2.
DR SUPFAM; SSF109715; DEK C-terminal domain; 1.
DR SUPFAM; SSF47592; SWIB/MDM2 domain; 2.
DR PROSITE; PS51998; DEK_C; 1.
DR PROSITE; PS51925; SWIB_MDM2; 2.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000233837}.
FT DOMAIN 1..56
FT /note="DEK-C"
FT /evidence="ECO:0000259|PROSITE:PS51998"
FT DOMAIN 136..213
FT /note="DM2"
FT /evidence="ECO:0000259|PROSITE:PS51925"
FT DOMAIN 252..331
FT /note="DM2"
FT /evidence="ECO:0000259|PROSITE:PS51925"
FT REGION 57..111
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 212..252
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 58..99
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 220..245
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 334 AA; 37842 MW; C9C3063C37476E71 CRC64;
MASEAELVQR LRDFLRTSDL STTTAAIVRR KLEEDFRVDL TDKKTFIREQ IDIFLGELHE
NEEEDGEADD VKLEEEEGGS GGEEDEDEEV EEDEEGEEKE GSSNGGSGSG KRRFDFLSFP
LFSNKLSVEV KKRGGGFTKL CSLSPLLQEF VGVPELARTE VVKRLWGYIR ENNLQDPSNK
RKIICDERLQ TLFKVNMIDM FQMNKALTNH IWPLSSESGP EKSSKEKPKK KAREDLDDTA
RKGKRQKGGA SGFLAPVPLS DALTKFIGTG ENILPRSDVI KRLWDYIKQN NLQDPADKRN
IICDDKLKEL FQVNSFTGFT VTKLLAAHFV KTKD
//
