ID A0A2I1EPQ1_9GLOM Unreviewed; 407 AA.
AC A0A2I1EPQ1;
DT 28-FEB-2018, integrated into UniProtKB/TrEMBL.
DT 28-FEB-2018, sequence version 1.
DT 27-MAR-2024, entry version 23.
DE RecName: Full=Chromatin structure-remodeling complex subunit SFH1 {ECO:0000256|ARBA:ARBA00041068};
DE AltName: Full=RSC complex subunit SFH1 {ECO:0000256|ARBA:ARBA00042480};
DE AltName: Full=SNF5 homolog 1 {ECO:0000256|ARBA:ARBA00041643};
GN ORFNames=RhiirA1_258919 {ECO:0000313|EMBL:PKC62448.1}, RhiirA4_423535
GN {ECO:0000313|EMBL:PKY50181.1}, RhiirA5_368785
GN {ECO:0000313|EMBL:PKC17689.1}, RhiirC2_523305
GN {ECO:0000313|EMBL:PKK68835.1};
OS Rhizophagus irregularis.
OC Eukaryota; Fungi; Fungi incertae sedis; Mucoromycota; Glomeromycotina;
OC Glomeromycetes; Glomerales; Glomeraceae; Rhizophagus.
OX NCBI_TaxID=588596 {ECO:0000313|EMBL:PKC17689.1, ECO:0000313|Proteomes:UP000232722};
RN [1] {ECO:0000313|Proteomes:UP000232722, ECO:0000313|Proteomes:UP000233469}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=A4 {ECO:0000313|EMBL:PKY50181.1,
RC ECO:0000313|Proteomes:UP000234323}, A5 {ECO:0000313|EMBL:PKC17689.1,
RC ECO:0000313|Proteomes:UP000232722}, and C2
RC {ECO:0000313|EMBL:PKK68835.1, ECO:0000313|Proteomes:UP000233469};
RA Ropars J., Sedzielewska K., Noel J., Charron P., Farinelli L., Marton T.,
RA Kruger M., Pelin A., Brachmann A., Corradi N.;
RT "Genome analyses suggest a sexual origin of heterokaryosis in a supposedly
RT ancient asexual fungus.";
RL Submitted (APR-2016) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:PKC17689.1, ECO:0000313|Proteomes:UP000232722}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=A5 {ECO:0000313|EMBL:PKC17689.1,
RC ECO:0000313|Proteomes:UP000232722};
RA Chen E.C., Morin E., Beaudet D., Noel J., Ndikumana S., Charron P.,
RA St-Onge C., Giorgi J., Grigoriev I.V., Roux C., Martin F.M., Corradi N.;
RT "Extensive intraspecific genome diversity in a model arbuscular mycorrhizal
RT fungus.";
RL Submitted (SEP-2017) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|Proteomes:UP000232688, ECO:0000313|Proteomes:UP000233469}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=A1 {ECO:0000313|EMBL:PKC62448.1,
RC ECO:0000313|Proteomes:UP000232688}, and C2
RC {ECO:0000313|EMBL:PKK68835.1, ECO:0000313|Proteomes:UP000233469};
RA Chen E.C.H., Morin E., Baudet D., Noel J., Ndikumana S., Charron P.,
RA St-Onge C., Giorgi J., Grigoriev I.V., Roux C., Martin F.M., Corradi N.;
RT "Extensive intraspecific genome diversity in a model arbuscular mycorrhizal
RT fungus.";
RL Submitted (OCT-2017) to the EMBL/GenBank/DDBJ databases.
RN [4] {ECO:0000313|EMBL:PKC62448.1, ECO:0000313|Proteomes:UP000232688}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=A1 {ECO:0000313|EMBL:PKC62448.1,
RC ECO:0000313|Proteomes:UP000232688};
RA Corradi N., Sedzielewska K., Noel J., Charron P., Farinelli L., Marton T.,
RA Kruger M., Pelin A., Brachmann A., Corradi N.;
RT "Genome analyses suggest a sexual origin of heterokaryosis in a supposedly
RT ancient asexual fungus.";
RL Submitted (OCT-2017) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the SNF5 family.
CC {ECO:0000256|ARBA:ARBA00010239}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PKC17689.1}.
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DR EMBL; LLXJ01000007; PKC17689.1; -; Genomic_DNA.
DR EMBL; LLXH01000856; PKC62448.1; -; Genomic_DNA.
DR EMBL; LLXL01000796; PKK68835.1; -; Genomic_DNA.
DR EMBL; LLXI01000836; PKY50181.1; -; Genomic_DNA.
DR VEuPathDB; FungiDB:FUN_013351; -.
DR VEuPathDB; FungiDB:GLOIN_2v1484107; -.
DR VEuPathDB; FungiDB:RhiirA1_258919; -.
DR OrthoDB; 11049at2759; -.
DR Proteomes; UP000232688; Unassembled WGS sequence.
DR Proteomes; UP000232722; Unassembled WGS sequence.
DR Proteomes; UP000233469; Unassembled WGS sequence.
DR Proteomes; UP000234323; Unassembled WGS sequence.
DR GO; GO:0000228; C:nuclear chromosome; IEA:InterPro.
DR GO; GO:0070603; C:SWI/SNF superfamily-type complex; IEA:UniProt.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0006338; P:chromatin remodeling; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00202; ZnF_GATA; 1.
DR Gene3D; 3.30.50.10; Erythroid Transcription Factor GATA-1, subunit A; 1.
DR InterPro; IPR006939; SNF5.
DR InterPro; IPR000679; Znf_GATA.
DR InterPro; IPR013088; Znf_NHR/GATA.
DR PANTHER; PTHR10019; SNF5; 1.
DR PANTHER; PTHR10019:SF5; SWI_SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY B MEMBER 1; 1.
DR Pfam; PF00320; GATA; 1.
DR Pfam; PF04855; SNF5; 1.
DR SMART; SM00401; ZnF_GATA; 1.
DR SUPFAM; SSF57716; Glucocorticoid receptor-like (DNA-binding domain); 1.
PE 3: Inferred from homology;
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000234323};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 351..404
FT /note="GATA-type"
FT /evidence="ECO:0000259|SMART:SM00401"
FT REGION 41..60
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 407 AA; 46386 MW; 3E97EA7769C8AC7F CRC64;
MNLQHNMISK TNSSKKKFYS TYASRLKQGN TALVLPMIRG GKKRQRGGGH GSLAEDSDDV
ADLFEDETRN TPPLEKRSAN GVTANGDIPV VKRARSRTKH VYNSHKELER NAEQKEILIP
IKLDFDIGTH KLRDTFTWNL NEKLITPEHF AEIMCVDLDL PSSEFVTVIS DTIRKQIQEN
EMMTDCNPPK DDSRVLINLD INVGKLSLRD RFEWDLSSDL TPEEFSKSLA SDLGIGGEFV
TLIAHSIHEQ LLKHKKEIKS DDSDNEHEPL KSIFRNIEDA DEWCPVLEIL TEEELEKIRL
DKERDIRRMR RATSRSIARI RPSRTLQNGL VLSPTSRMRS DLKATKLSVE ELVHWRCQHC
GIDGHNTPLV RKGPDGGKTL CNACGLVWLN KGELPPHRKA LFKKDDD
//
