ID A0A2I3RPD5_PANTR Unreviewed; 306 AA.
AC A0A2I3RPD5;
DT 28-FEB-2018, integrated into UniProtKB/TrEMBL.
DT 28-FEB-2018, sequence version 1.
DT 27-MAR-2024, entry version 27.
DE RecName: Full=Y-box-binding protein 1 {ECO:0000256|ARBA:ARBA00039347};
DE AltName: Full=Y-box transcription factor {ECO:0000256|ARBA:ARBA00042629};
GN Name=LOC747903 {ECO:0000313|Ensembl:ENSPTRP00000066571.1};
OS Pan troglodytes (Chimpanzee).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Pan.
OX NCBI_TaxID=9598 {ECO:0000313|Ensembl:ENSPTRP00000066571.1, ECO:0000313|Proteomes:UP000002277};
RN [1] {ECO:0000313|Ensembl:ENSPTRP00000066571.1, ECO:0000313|Proteomes:UP000002277}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=16136131; DOI=10.1038/nature04072;
RG Chimpanzee sequencing and analysis consortium;
RT "Initial sequence of the chimpanzee genome and comparison with the human
RT genome.";
RL Nature 437:69-87(2005).
RN [2] {ECO:0000313|Ensembl:ENSPTRP00000066571.1}
RP IDENTIFICATION.
RG Ensembl;
RL Submitted (NOV-2023) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the YBX1 family.
CC {ECO:0000256|ARBA:ARBA00038231}.
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DR EMBL; AACZ04033387; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR AlphaFoldDB; A0A2I3RPD5; -.
DR Ensembl; ENSPTRT00000096818.1; ENSPTRP00000066571.1; ENSPTRG00000043077.1.
DR GeneTree; ENSGT00940000153341; -.
DR InParanoid; A0A2I3RPD5; -.
DR OMA; YRNYRRP; -.
DR Proteomes; UP000002277; Chromosome 9.
DR Bgee; ENSPTRG00000043077; Expressed in hindlimb stylopod muscle and 12 other cell types or tissues.
DR GO; GO:1990124; C:messenger ribonucleoprotein complex; IBA:GO_Central.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0003676; F:nucleic acid binding; IBA:GO_Central.
DR GO; GO:0010468; P:regulation of gene expression; IBA:GO_Central.
DR CDD; cd04458; CSP_CDS; 1.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR InterPro; IPR011129; CSD.
DR InterPro; IPR002059; CSP_DNA-bd.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR PANTHER; PTHR11544; COLD SHOCK DOMAIN CONTAINING PROTEINS; 1.
DR PANTHER; PTHR11544:SF68; Y-BOX-BINDING PROTEIN 1; 1.
DR Pfam; PF00313; CSD; 1.
DR PRINTS; PR00050; COLDSHOCK.
DR SMART; SM00357; CSP; 1.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
DR PROSITE; PS51857; CSD_2; 1.
PE 3: Inferred from homology;
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000002277}.
FT DOMAIN 47..116
FT /note="CSD"
FT /evidence="ECO:0000259|PROSITE:PS51857"
FT REGION 1..38
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 113..306
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..26
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 148..163
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 232..251
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 270..288
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 306 AA; 34229 MW; 62C3AC50E7D229B4 CRC64;
MSSEAETQQP AADTHPSTTG SGAGSGGPGG LTSAAPAGGD KKVIATKVLG TVKWFSVRNG
YGFINRNDTK EDVFVHQTAR KKNNPRKYLR SVGDGETVEF DVVEGEKAAE AANVTGPGGV
PVQGSKYAAD RNHYRRYPRR RQNYQNSESG EKNEGSESAP EGQAQQRRPY RRRRFPPYYM
RRPYGRRPQY SNPPVQGEVM EGADNQGAGE QGRPVRQNTY RGYRPRFLKG PPRQRQPRED
GNDEDKENQG DETQGQQPPQ RRYRRNFNCR RRHPENPKPQ DGKETKAADP PAENSSTPEA
ERGRTE
//
