ID A0A2I4DIL6_JUGRE Unreviewed; 501 AA.
AC A0A2I4DIL6;
DT 28-FEB-2018, integrated into UniProtKB/TrEMBL.
DT 02-DEC-2020, sequence version 2.
DT 27-MAR-2024, entry version 28.
DE SubName: Full=Lysine-specific demethylase JMJ706-like {ECO:0000313|RefSeq:XP_018806988.2};
GN Name=LOC108980505 {ECO:0000313|RefSeq:XP_018806988.2};
GN ORFNames=F2P56_031014 {ECO:0000313|EMBL:KAF5450684.1};
OS Juglans regia (English walnut).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fagales; Juglandaceae; Juglans.
OX NCBI_TaxID=51240 {ECO:0000313|Proteomes:UP000235220, ECO:0000313|RefSeq:XP_018806988.2};
RN [1] {ECO:0000313|EMBL:KAF5450684.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaves {ECO:0000313|EMBL:KAF5450684.1};
RA Martinez-Garcia P.J., Crepeau M.W., Puiu D., Gonzalez-Ibeas D., Whalen J.,
RA Stevens K., Paul R., Butterfield T., Britton M., Reagan R., Chakraborty S.,
RA Walawage S.L., Vasquez-Gross H.A., Cardeno C., Famula R., Pratt K.,
RA Kuruganti S., Aradhya M.K., Leslie C.A., Dandekar A.M., Salzberg S.L.,
RA Wegrzyn J.L., Langley C.H., Neale D.B.;
RL Submitted (OCT-2015) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:KAF5450684.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaves {ECO:0000313|EMBL:KAF5450684.1};
RA Marrano A., Britton M., Zimin A.V., Zaini P.A., Workman R., Puiu D.,
RA Bianco L., Allen B.J., Troggio M., Leslie C.A., Timp W., Dendekar A.,
RA Salzberg S.L., Neale D.B.;
RT "Walnut 2.0.";
RL Submitted (MAR-2020) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|RefSeq:XP_018806988.2}
RP IDENTIFICATION.
RC TISSUE=Leaves {ECO:0000313|RefSeq:XP_018806988.2};
RG RefSeq;
RL Submitted (NOV-2023) to UniProtKB.
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DR EMBL; LIHL02000013; KAF5450684.1; -; Genomic_DNA.
DR RefSeq; XP_018806988.2; XM_018951443.2.
DR STRING; 51240.A0A2I4DIL6; -.
DR EnsemblPlants; Jr13_25930_p1; cds.Jr13_25930_p1; Jr13_25930.
DR Gramene; Jr13_25930_p1; cds.Jr13_25930_p1; Jr13_25930.
DR KEGG; jre:108980505; -.
DR OrthoDB; 998957at2759; -.
DR Proteomes; UP000235220; Chromosome 13.
DR Proteomes; UP000619265; Unassembled WGS sequence.
DR GO; GO:0000785; C:chromatin; IBA:GO_Central.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0032452; F:histone demethylase activity; IBA:GO_Central.
DR GO; GO:0006338; P:chromatin remodeling; IBA:GO_Central.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:UniProt.
DR GO; GO:0010468; P:regulation of gene expression; IBA:GO_Central.
DR Gene3D; 2.60.120.650; Cupin; 1.
DR InterPro; IPR003347; JmjC_dom.
DR InterPro; IPR003349; JmjN.
DR InterPro; IPR004198; Znf_C5HC2.
DR PANTHER; PTHR10694; LYSINE-SPECIFIC DEMETHYLASE; 1.
DR PANTHER; PTHR10694:SF143; LYSINE-SPECIFIC DEMETHYLASE JMJ706-LIKE; 1.
DR Pfam; PF02373; JmjC; 1.
DR Pfam; PF02375; JmjN; 1.
DR Pfam; PF02928; zf-C5HC2; 1.
DR SMART; SM00558; JmjC; 1.
DR SMART; SM00545; JmjN; 1.
DR SUPFAM; SSF51197; Clavaminate synthase-like; 1.
DR PROSITE; PS51184; JMJC; 1.
DR PROSITE; PS51183; JMJN; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000235220};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 39..80
FT /note="JmjN"
FT /evidence="ECO:0000259|PROSITE:PS51183"
FT DOMAIN 183..356
FT /note="JmjC"
FT /evidence="ECO:0000259|PROSITE:PS51184"
SQ SEQUENCE 501 AA; 56984 MW; 756083FB1ABF1E06 CRC64;
MKKQSPLKAA KAFTSRAAKV AIDESHLAEL EWIDDILECP VYHPSKIEFE DPLTYLQHIA
PEASKYGICK IILPIDASVP ASVVLMKELG NFKFETVVQP FRLAKWDVND KISFYRRGRQ
YTYREFEKMA NKESACQVSC SSCDSPAYME KEFWHRLVRG KKETVEYGVN VDGSAFSSDP
RDQLGKSKWN LKNLSRLHKS VLRLVGRVIP GITDPMLYIG MQFGMFAWHV EDHYLFSINY
HHSGAPKTWY GVPGHAAPQF ERVVHDHVYS QDIISSNGED DAFELLSEKT TMFLPSILLQ
HHVPVYKAEQ VPGEFVITFP RAYHAGFSHG FNCGEAVNFA TADWFPMGEL ANQRYALLKK
IPIISYEELL CNEAMLLLMS SKDNSGDSST DAVSQRAVKI SFVRLIRQHK QALHRIKHSS
ASSPHAEGTL LCGLCKRDCY LAYNMCNFCY SDPLCLFHEI DLHHCSCGHE RTIFLRPDIS
AMEDAAKTFE QEEEIFSGLQ N
//
