ID A0A2I4DTJ5_JUGRE Unreviewed; 443 AA.
AC A0A2I4DTJ5;
DT 28-FEB-2018, integrated into UniProtKB/TrEMBL.
DT 28-FEB-2018, sequence version 1.
DT 27-MAR-2024, entry version 30.
DE SubName: Full=COP9 signalosome complex subunit 1-like {ECO:0000313|RefSeq:XP_018810472.1};
GN Name=LOC108983337 {ECO:0000313|RefSeq:XP_018810472.1};
GN ORFNames=F2P56_026637 {ECO:0000313|EMBL:KAF5451536.1};
OS Juglans regia (English walnut).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fagales; Juglandaceae; Juglans.
OX NCBI_TaxID=51240 {ECO:0000313|Proteomes:UP000235220, ECO:0000313|RefSeq:XP_018810472.1};
RN [1] {ECO:0000313|EMBL:KAF5451536.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaves {ECO:0000313|EMBL:KAF5451536.1};
RA Martinez-Garcia P.J., Crepeau M.W., Puiu D., Gonzalez-Ibeas D., Whalen J.,
RA Stevens K., Paul R., Butterfield T., Britton M., Reagan R., Chakraborty S.,
RA Walawage S.L., Vasquez-Gross H.A., Cardeno C., Famula R., Pratt K.,
RA Kuruganti S., Aradhya M.K., Leslie C.A., Dandekar A.M., Salzberg S.L.,
RA Wegrzyn J.L., Langley C.H., Neale D.B.;
RL Submitted (OCT-2015) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:KAF5451536.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaves {ECO:0000313|EMBL:KAF5451536.1};
RA Marrano A., Britton M., Zimin A.V., Zaini P.A., Workman R., Puiu D.,
RA Bianco L., Allen B.J., Troggio M., Leslie C.A., Timp W., Dendekar A.,
RA Salzberg S.L., Neale D.B.;
RT "Walnut 2.0.";
RL Submitted (MAR-2020) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|RefSeq:XP_018810472.1}
RP IDENTIFICATION.
RC TISSUE=Leaves {ECO:0000313|RefSeq:XP_018810472.1};
RG RefSeq;
RL Submitted (NOV-2023) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|ARBA:ARBA00004496}.
CC Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the CSN1 family.
CC {ECO:0000256|ARBA:ARBA00008793}.
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DR EMBL; LIHL02000012; KAF5451536.1; -; Genomic_DNA.
DR RefSeq; XP_018810472.1; XM_018954927.2.
DR STRING; 51240.A0A2I4DTJ5; -.
DR EnsemblPlants; Jr12_03170_p1; cds.Jr12_03170_p1; Jr12_03170.
DR GeneID; 108983337; -.
DR Gramene; Jr12_03170_p1; cds.Jr12_03170_p1; Jr12_03170.
DR KEGG; jre:108983337; -.
DR OrthoDB; 1601at2759; -.
DR Proteomes; UP000235220; Chromosome 12.
DR Proteomes; UP000619265; Unassembled WGS sequence.
DR GO; GO:0008180; C:COP9 signalosome; IBA:GO_Central.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR Gene3D; 1.25.40.570; -; 1.
DR InterPro; IPR048624; CSN1_C.
DR InterPro; IPR000717; PCI_dom.
DR InterPro; IPR019585; Rpn7/CSN1.
DR InterPro; IPR045135; Rpn7_N.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR14145; 26S PROTESOME SUBUNIT 6; 1.
DR PANTHER; PTHR14145:SF2; COP9 SIGNALOSOME COMPLEX SUBUNIT 1; 1.
DR Pfam; PF21151; CSN1_C; 1.
DR Pfam; PF01399; PCI; 1.
DR Pfam; PF10602; RPN7; 1.
DR SMART; SM00088; PINT; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS50250; PCI; 1.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Reference proteome {ECO:0000313|Proteomes:UP000235220}.
FT DOMAIN 229..402
FT /note="PCI"
FT /evidence="ECO:0000259|PROSITE:PS50250"
FT REGION 1..30
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 114..141
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 1..29
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 443 AA; 50686 MW; E4627A4AEED39183 CRC64;
MEPEDSPSRP LIDEIHSNGD IEDPSRSKRP IISSGEQLDV EAYASLYQGR TKIMRLLFIA
DHCEGNPGMR LEALRMAYEE IKKGENTQLF REVVQKIDGK MGPDYDSAWS EMVDRRAEQK
KEKLENELNA YRTNLIKESI RMGYNDFGDF YYAHGALGDA FKSYVRTRDY CTTSKHIIHM
CMSAILVSIE MGQFTHVTSY VSKAEQSSEA LDPITASKLR CAAGLAHLEA KKYKLAARKF
LEAGPELASH YNEVISPQDV ATYGGLSALA SFDRTELKHK VIDNDNFRNF LELVPEVREL
INDFYSSHYA SCLDYLGNLK ANLLLDIHLH DHVESLYDQI RNKALIQYTH PFVSVDLRMM
ANAFKTSIAG LEKELETLIT ENQIQARIDS HNKILYARHA DQRNATFQRV LQTGSEFDRD
VRSMLLRANL IKHEYNLRAS RKL
//
