ID A0A2I4EGJ5_JUGRE Unreviewed; 246 AA.
AC A0A2I4EGJ5;
DT 28-FEB-2018, integrated into UniProtKB/TrEMBL.
DT 28-FEB-2018, sequence version 1.
DT 27-MAR-2024, entry version 28.
DE SubName: Full=Agamous-like MADS-box protein AP1 {ECO:0000313|RefSeq:XP_018818517.1};
GN Name=LOC108989394 {ECO:0000313|RefSeq:XP_018818517.1};
GN ORFNames=F2P56_036005 {ECO:0000313|EMBL:KAF5443450.1};
OS Juglans regia (English walnut).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fagales; Juglandaceae; Juglans.
OX NCBI_TaxID=51240 {ECO:0000313|Proteomes:UP000235220, ECO:0000313|RefSeq:XP_018818517.1};
RN [1] {ECO:0000313|EMBL:KAF5443450.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaves {ECO:0000313|EMBL:KAF5443450.1};
RA Martinez-Garcia P.J., Crepeau M.W., Puiu D., Gonzalez-Ibeas D., Whalen J.,
RA Stevens K., Paul R., Butterfield T., Britton M., Reagan R., Chakraborty S.,
RA Walawage S.L., Vasquez-Gross H.A., Cardeno C., Famula R., Pratt K.,
RA Kuruganti S., Aradhya M.K., Leslie C.A., Dandekar A.M., Salzberg S.L.,
RA Wegrzyn J.L., Langley C.H., Neale D.B.;
RL Submitted (OCT-2015) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:KAF5443450.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaves {ECO:0000313|EMBL:KAF5443450.1};
RA Marrano A., Britton M., Zimin A.V., Zaini P.A., Workman R., Puiu D.,
RA Bianco L., Allen B.J., Troggio M., Leslie C.A., Timp W., Dendekar A.,
RA Salzberg S.L., Neale D.B.;
RT "Walnut 2.0.";
RL Submitted (MAR-2020) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|RefSeq:XP_018818517.1}
RP IDENTIFICATION.
RC TISSUE=Leaves {ECO:0000313|RefSeq:XP_018818517.1};
RG RefSeq;
RL Submitted (NOV-2023) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR EMBL; LIHL02000016; KAF5443450.1; -; Genomic_DNA.
DR RefSeq; XP_018818517.1; XM_018962972.2.
DR EnsemblPlants; Jr16_13060_p1; cds.Jr16_13060_p1; Jr16_13060.
DR GeneID; 108989394; -.
DR Gramene; Jr16_13060_p1; cds.Jr16_13060_p1; Jr16_13060.
DR KEGG; jre:108989394; -.
DR OrthoDB; 448298at2759; -.
DR Proteomes; UP000235220; Chromosome 16.
DR Proteomes; UP000619265; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0000981; F:DNA-binding transcription factor activity, RNA polymerase II-specific; IBA:GO_Central.
DR GO; GO:0046983; F:protein dimerization activity; IEA:InterPro.
DR GO; GO:0000978; F:RNA polymerase II cis-regulatory region sequence-specific DNA binding; IBA:GO_Central.
DR GO; GO:0045944; P:positive regulation of transcription by RNA polymerase II; IEA:InterPro.
DR GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IBA:GO_Central.
DR CDD; cd00265; MADS_MEF2_like; 1.
DR Gene3D; 3.40.1810.10; Transcription factor, MADS-box; 1.
DR InterPro; IPR033896; MADS_MEF2-like.
DR InterPro; IPR002487; TF_Kbox.
DR InterPro; IPR002100; TF_MADSbox.
DR InterPro; IPR036879; TF_MADSbox_sf.
DR PANTHER; PTHR48019:SF30; AGAMOUS-LIKE MADS-BOX PROTEIN AGL8 HOMOLOG; 1.
DR PANTHER; PTHR48019; SERUM RESPONSE FACTOR HOMOLOG; 1.
DR Pfam; PF01486; K-box; 1.
DR Pfam; PF00319; SRF-TF; 1.
DR PRINTS; PR00404; MADSDOMAIN.
DR SMART; SM00432; MADS; 1.
DR SUPFAM; SSF55455; SRF-like; 1.
DR PROSITE; PS51297; K_BOX; 1.
DR PROSITE; PS00350; MADS_BOX_1; 1.
DR PROSITE; PS50066; MADS_BOX_2; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000235220};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 1..61
FT /note="MADS-box"
FT /evidence="ECO:0000259|PROSITE:PS50066"
FT DOMAIN 89..179
FT /note="K-box"
FT /evidence="ECO:0000259|PROSITE:PS51297"
FT COILED 126..175
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 246 AA; 28340 MW; A56F8DA2A5DF5D74 CRC64;
MGRGRVQLKR IENKINRQVT FSKRRGGLLK KAHEISVLCD AEVGLIVFSN KGKLFEYSTD
SCMEKILERY ESYSYAEGKL VTSTDSEFQG NWSFEFSRLK AKVELLQRNH GHYLGDDLGS
LSHKELQHLE QQLDASLKRI RARKTQLMHE RISDLQRKEK AIKEQNTVLA KKLKEKEETV
APQAQWEQQN YGPNGSSSFL LPQQPPCSNI GGSTDWEQEP EMRRNHELDL TLEPIYNSCH
LGCFAL
//
