ID A0A2I4FD18_JUGRE Unreviewed; 557 AA.
AC A0A2I4FD18;
DT 28-FEB-2018, integrated into UniProtKB/TrEMBL.
DT 28-FEB-2018, sequence version 1.
DT 27-MAR-2024, entry version 28.
DE SubName: Full=SWI/SNF complex subunit SWI3A {ECO:0000313|RefSeq:XP_018829547.1};
GN Name=LOC108997615 {ECO:0000313|RefSeq:XP_018829547.1};
GN ORFNames=F2P56_003268 {ECO:0000313|EMBL:KAF5476521.1};
OS Juglans regia (English walnut).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fagales; Juglandaceae; Juglans.
OX NCBI_TaxID=51240 {ECO:0000313|Proteomes:UP000235220, ECO:0000313|RefSeq:XP_018829547.1};
RN [1] {ECO:0000313|EMBL:KAF5476521.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaves {ECO:0000313|EMBL:KAF5476521.1};
RA Martinez-Garcia P.J., Crepeau M.W., Puiu D., Gonzalez-Ibeas D., Whalen J.,
RA Stevens K., Paul R., Butterfield T., Britton M., Reagan R., Chakraborty S.,
RA Walawage S.L., Vasquez-Gross H.A., Cardeno C., Famula R., Pratt K.,
RA Kuruganti S., Aradhya M.K., Leslie C.A., Dandekar A.M., Salzberg S.L.,
RA Wegrzyn J.L., Langley C.H., Neale D.B.;
RL Submitted (OCT-2015) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:KAF5476521.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaves {ECO:0000313|EMBL:KAF5476521.1};
RA Marrano A., Britton M., Zimin A.V., Zaini P.A., Workman R., Puiu D.,
RA Bianco L., Allen B.J., Troggio M., Leslie C.A., Timp W., Dendekar A.,
RA Salzberg S.L., Neale D.B.;
RT "Walnut 2.0.";
RL Submitted (MAR-2020) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|RefSeq:XP_018829547.1}
RP IDENTIFICATION.
RC TISSUE=Leaves {ECO:0000313|RefSeq:XP_018829547.1};
RG RefSeq;
RL Submitted (NOV-2023) to UniProtKB.
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DR EMBL; LIHL02000002; KAF5476521.1; -; Genomic_DNA.
DR RefSeq; XP_018829547.1; XM_018974002.2.
DR STRING; 51240.A0A2I4FD18; -.
DR EnsemblPlants; Jr02_00570_p1; cds.Jr02_00570_p1; Jr02_00570.
DR GeneID; 108997615; -.
DR Gramene; Jr02_00570_p1; cds.Jr02_00570_p1; Jr02_00570.
DR KEGG; jre:108997615; -.
DR OrthoDB; 10062at2759; -.
DR Proteomes; UP000235220; Chromosome 2.
DR Proteomes; UP000619265; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:EnsemblPlants.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR CDD; cd00167; SANT; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR001005; SANT/Myb.
DR InterPro; IPR017884; SANT_dom.
DR InterPro; IPR032451; SMARCC_C.
DR InterPro; IPR007526; SWIRM.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR PANTHER; PTHR12802; SWI/SNF COMPLEX-RELATED; 1.
DR PANTHER; PTHR12802:SF140; SWI_SNF COMPLEX SUBUNIT SWI3A; 1.
DR Pfam; PF00249; Myb_DNA-binding; 1.
DR Pfam; PF04433; SWIRM; 1.
DR Pfam; PF16495; SWIRM-assoc_1; 1.
DR SMART; SM00717; SANT; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 2.
DR PROSITE; PS50090; MYB_LIKE; 1.
DR PROSITE; PS51293; SANT; 1.
DR PROSITE; PS50934; SWIRM; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000235220}.
FT DOMAIN 20..117
FT /note="SWIRM"
FT /evidence="ECO:0000259|PROSITE:PS50934"
FT DOMAIN 241..292
FT /note="SANT"
FT /evidence="ECO:0000259|PROSITE:PS51293"
FT DOMAIN 246..280
FT /note="Myb-like"
FT /evidence="ECO:0000259|PROSITE:PS50090"
FT REGION 433..452
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 557 AA; 62071 MW; 2B2A5D204B236B3E CRC64;
METTTHDPTS KPDEPELDLY TIPSHSSWFL WDEIHETEKL ALREFFDGSS FSRTPKIYKE
YRDFIINKYR EEPSRRLSFT DVRKSLVGDV SLLHKVFRFL DERGLINFSA PSGNNTSLVV
VEDGEDRSRI KIEGVVPNAV RVGASPNSPK PISVPPNVVD NAVLNGFKFL PLASYSDVFG
DLVKPKGLIC GNCGGICDSG HYKYTKGEFI ICINCFKNQN YGENRSMDEF KLNECAENKG
SDGAIWTEAE TLLLLESVLK HGDDWELVAQ NVQTKSKVDC ILKLIELPFG ELVLGSAHKY
GNYGGLNGSM NGTKQVQLSS SEHHEAIRLE GQCHEQINEM EENGDTVDQG HPSKRQRIAS
LSDAGSSLMK QVARISTMVG SQTTAAAAEA AVTALCDENS FPREIFDVEE DHISNGFSPP
TASYEAERVF KNEESKTKEG LTQSETANTP HKRDDIPLTL QIRASIATAL GAAAARAKLL
AEQEDREVEN LVAIIIETQM KKLHQKIKHF EDLELIMEKE YAEMEELKDC LLAERIGVLQ
KAINAGISRW RDHSVKS
//
