ID A0A2I4FY78_JUGRE Unreviewed; 534 AA.
AC A0A2I4FY78;
DT 28-FEB-2018, integrated into UniProtKB/TrEMBL.
DT 28-FEB-2018, sequence version 1.
DT 27-MAR-2024, entry version 28.
DE SubName: Full=Transcription factor ICE1 {ECO:0000313|RefSeq:XP_018836604.1};
GN Name=LOC109003084 {ECO:0000313|RefSeq:XP_018836604.1};
GN ORFNames=F2P56_019507 {ECO:0000313|EMBL:KAF5459568.1};
OS Juglans regia (English walnut).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fagales; Juglandaceae; Juglans.
OX NCBI_TaxID=51240 {ECO:0000313|Proteomes:UP000235220, ECO:0000313|RefSeq:XP_018836604.1};
RN [1] {ECO:0000313|EMBL:KAF5459568.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaves {ECO:0000313|EMBL:KAF5459568.1};
RA Martinez-Garcia P.J., Crepeau M.W., Puiu D., Gonzalez-Ibeas D., Whalen J.,
RA Stevens K., Paul R., Butterfield T., Britton M., Reagan R., Chakraborty S.,
RA Walawage S.L., Vasquez-Gross H.A., Cardeno C., Famula R., Pratt K.,
RA Kuruganti S., Aradhya M.K., Leslie C.A., Dandekar A.M., Salzberg S.L.,
RA Wegrzyn J.L., Langley C.H., Neale D.B.;
RL Submitted (OCT-2015) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:KAF5459568.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaves {ECO:0000313|EMBL:KAF5459568.1};
RA Marrano A., Britton M., Zimin A.V., Zaini P.A., Workman R., Puiu D.,
RA Bianco L., Allen B.J., Troggio M., Leslie C.A., Timp W., Dendekar A.,
RA Salzberg S.L., Neale D.B.;
RT "Walnut 2.0.";
RL Submitted (MAR-2020) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|RefSeq:XP_018836604.1}
RP IDENTIFICATION.
RC TISSUE=Leaves {ECO:0000313|RefSeq:XP_018836604.1};
RG RefSeq;
RL Submitted (NOV-2023) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR EMBL; LIHL02000009; KAF5459568.1; -; Genomic_DNA.
DR RefSeq; XP_018836604.1; XM_018981059.2.
DR STRING; 51240.A0A2I4FY78; -.
DR EnsemblPlants; Jr09_00180_p1; cds.Jr09_00180_p1; Jr09_00180.
DR GeneID; 109003084; -.
DR Gramene; Jr09_00180_p1; cds.Jr09_00180_p1; Jr09_00180.
DR KEGG; jre:109003084; -.
DR OrthoDB; 1217952at2759; -.
DR Proteomes; UP000235220; Chromosome 9.
DR Proteomes; UP000619265; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IBA:GO_Central.
DR GO; GO:0046983; F:protein dimerization activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IBA:GO_Central.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IBA:GO_Central.
DR CDD; cd04873; ACT_UUR-ACR-like; 1.
DR CDD; cd11443; bHLH_AtAMS_like; 1.
DR Gene3D; 4.10.280.10; Helix-loop-helix DNA-binding domain; 1.
DR InterPro; IPR011598; bHLH_dom.
DR InterPro; IPR036638; HLH_DNA-bd_sf.
DR PANTHER; PTHR31945:SF159; BHLH TRANSCRIPTIONAL FACTOR; 1.
DR PANTHER; PTHR31945; TRANSCRIPTION FACTOR SCREAM2-RELATED; 1.
DR Pfam; PF00010; HLH; 1.
DR SMART; SM00353; HLH; 1.
DR SUPFAM; SSF47459; HLH, helix-loop-helix DNA-binding domain; 1.
DR PROSITE; PS50888; BHLH; 1.
PE 4: Predicted;
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000235220};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 343..392
FT /note="BHLH"
FT /evidence="ECO:0000259|PROSITE:PS50888"
FT REGION 1..37
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 255..295
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 312..345
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 404..430
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 22..37
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 268..290
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 316..335
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 404..418
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 534 AA; 57837 MW; 59E877D2B245C2E2 CRC64;
MLSRVNGVWM DDREDHDPAS WARTTNDANT SNSCGVAEKN EHDLGSLSTF KSMLEIEDDW
YNMANNTLQS HTDIRDLTFS PNLADHPDNL LLNPVDSSSS CSPSSSVFTN LDPSQVNYFL
PPKPTLSSLI NGLSSNPLEN GFDLGCEVGF LEAQTSNAST LLNRGGGVLS NFTDLSTNSQ
INAPSICSDS QLRLPNFPET GAGFVGFKAF DGGSGNALFM NRSKILRPLE SFPSMGAQPT
LFQKRAALRK NIADSGGNLS ISTSVEGDKG KTETHEPGEG KRKLSNGDDV EDASFDGSGL
NYDSDEFMEN DKAEGNAKNT GGNSSNATST VTGGGEQKGK KKGLPAKNLM AERRRRKKLN
DRLYLLRSVV PKISKMDRAS ILGDAIEYLK ELLQRINDLH NELESTTPGS SLTPTTSFHP
LTPTPPALPS HIKEELIPSS LPSPNSQAAR VEVRLREGRA VNIHMFCGRR PGLLLSTMRA
LDNLGLDIQQ AVISCFNGFA MDIFRAEQCK EGQDVHPEQI KAVLLDSAGV HGMM
//
