ID A0A2I4G6I1_JUGRE Unreviewed; 347 AA.
AC A0A2I4G6I1;
DT 28-FEB-2018, integrated into UniProtKB/TrEMBL.
DT 28-FEB-2018, sequence version 1.
DT 27-MAR-2024, entry version 29.
DE RecName: Full=AT-hook motif nuclear-localized protein {ECO:0000256|RuleBase:RU367031};
GN Name=LOC109005165 {ECO:0000313|RefSeq:XP_018839512.1};
GN ORFNames=F2P56_010222 {ECO:0000313|EMBL:KAF5473622.1};
OS Juglans regia (English walnut).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fagales; Juglandaceae; Juglans.
OX NCBI_TaxID=51240 {ECO:0000313|Proteomes:UP000235220, ECO:0000313|RefSeq:XP_018839512.1};
RN [1] {ECO:0000313|EMBL:KAF5473622.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaves {ECO:0000313|EMBL:KAF5473622.1};
RA Martinez-Garcia P.J., Crepeau M.W., Puiu D., Gonzalez-Ibeas D., Whalen J.,
RA Stevens K., Paul R., Butterfield T., Britton M., Reagan R., Chakraborty S.,
RA Walawage S.L., Vasquez-Gross H.A., Cardeno C., Famula R., Pratt K.,
RA Kuruganti S., Aradhya M.K., Leslie C.A., Dandekar A.M., Salzberg S.L.,
RA Wegrzyn J.L., Langley C.H., Neale D.B.;
RL Submitted (OCT-2015) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:KAF5473622.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaves {ECO:0000313|EMBL:KAF5473622.1};
RA Marrano A., Britton M., Zimin A.V., Zaini P.A., Workman R., Puiu D.,
RA Bianco L., Allen B.J., Troggio M., Leslie C.A., Timp W., Dendekar A.,
RA Salzberg S.L., Neale D.B.;
RT "Walnut 2.0.";
RL Submitted (MAR-2020) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|RefSeq:XP_018839512.1}
RP IDENTIFICATION.
RC TISSUE=Leaves {ECO:0000313|RefSeq:XP_018839512.1};
RG RefSeq;
RL Submitted (NOV-2023) to UniProtKB.
CC -!- FUNCTION: Transcription factor that specifically binds AT-rich DNA
CC sequences related to the nuclear matrix attachment regions (MARs).
CC {ECO:0000256|ARBA:ARBA00003687, ECO:0000256|RuleBase:RU367031}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|RuleBase:RU367031}.
CC -!- DOMAIN: The PPC domain mediates interactions between AHL proteins.
CC {ECO:0000256|RuleBase:RU367031}.
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DR EMBL; LIHL02000004; KAF5473622.1; -; Genomic_DNA.
DR RefSeq; XP_018839512.1; XM_018983967.2.
DR EnsemblPlants; Jr04_22230_p1; cds.Jr04_22230_p1; Jr04_22230.
DR GeneID; 109005165; -.
DR Gramene; Jr04_22230_p1; cds.Jr04_22230_p1; Jr04_22230.
DR OrthoDB; 1222546at2759; -.
DR Proteomes; UP000235220; Chromosome 4.
DR Proteomes; UP000619265; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003680; F:minor groove of adenine-thymine-rich DNA binding; IEA:UniProtKB-UniRule.
DR CDD; cd11378; DUF296; 1.
DR InterPro; IPR039605; AHL.
DR InterPro; IPR017956; AT_hook_DNA-bd_motif.
DR InterPro; IPR005175; PPC_dom.
DR PANTHER; PTHR31500:SF56; AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN; 1.
DR PANTHER; PTHR31500; AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9; 1.
DR Pfam; PF02178; AT_hook; 2.
DR Pfam; PF03479; PCC; 1.
DR SMART; SM00384; AT_hook; 2.
DR SUPFAM; SSF117856; AF0104/ALDC/Ptd012-like; 1.
DR PROSITE; PS51742; PPC; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|RuleBase:RU367031};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242, ECO:0000256|RuleBase:RU367031};
KW Reference proteome {ECO:0000313|Proteomes:UP000235220};
KW Transcription {ECO:0000256|RuleBase:RU367031};
KW Transcription regulation {ECO:0000256|RuleBase:RU367031}.
FT DOMAIN 130..273
FT /note="PPC"
FT /evidence="ECO:0000259|PROSITE:PS51742"
FT REGION 1..23
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 54..80
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 95..121
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 323..347
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 7..23
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 323..339
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 347 AA; 36059 MW; A3D83069A2863227 CRC64;
MEEKESTVSG SLGNSDTDSA PAPLSNVALP QVVLNRPGDM SLAVITTTTT TTSTMLTSTS
TTPGSAELFG KKKRGRPRKY DADGNLRLSY IVPPPPGFTL SPSSPPEFSS KRGRGRPSGS
GNWQLLASLG GDFTPHVVTV NTGEDVAGKI LSFSQKSPRG ICILSANGAV SNVTIRQPGS
SGGILTYEGR FEILSLSGSF TVTDTVGKRS RTGGLSISLA GPDGRVIGGG IAGLLVAAGP
IQIVVGSFMP NGYKAHKKKY HREQTMLSPI TGAPDMLARS ITSTKLEGSL FNPVELKAQN
NAEAEADNGV GVKLNANATQ NTAIRNGSEP TSDQRPSPDI NVSAFDE
//