ID A0A2I4HQN0_JUGRE Unreviewed; 227 AA.
AC A0A2I4HQN0;
DT 28-FEB-2018, integrated into UniProtKB/TrEMBL.
DT 28-FEB-2018, sequence version 1.
DT 27-MAR-2024, entry version 26.
DE RecName: Full=Homologous-pairing protein 2 homolog {ECO:0000256|ARBA:ARBA00016093};
GN Name=LOC109020449 {ECO:0000313|RefSeq:XP_018858454.1};
GN ORFNames=F2P56_011870 {ECO:0000313|EMBL:KAF5467638.1};
OS Juglans regia (English walnut).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fagales; Juglandaceae; Juglans.
OX NCBI_TaxID=51240 {ECO:0000313|Proteomes:UP000235220, ECO:0000313|RefSeq:XP_018858454.1};
RN [1] {ECO:0000313|EMBL:KAF5467638.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaves {ECO:0000313|EMBL:KAF5467638.1};
RA Martinez-Garcia P.J., Crepeau M.W., Puiu D., Gonzalez-Ibeas D., Whalen J.,
RA Stevens K., Paul R., Butterfield T., Britton M., Reagan R., Chakraborty S.,
RA Walawage S.L., Vasquez-Gross H.A., Cardeno C., Famula R., Pratt K.,
RA Kuruganti S., Aradhya M.K., Leslie C.A., Dandekar A.M., Salzberg S.L.,
RA Wegrzyn J.L., Langley C.H., Neale D.B.;
RL Submitted (OCT-2015) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:KAF5467638.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaves {ECO:0000313|EMBL:KAF5467638.1};
RA Marrano A., Britton M., Zimin A.V., Zaini P.A., Workman R., Puiu D.,
RA Bianco L., Allen B.J., Troggio M., Leslie C.A., Timp W., Dendekar A.,
RA Salzberg S.L., Neale D.B.;
RT "Walnut 2.0.";
RL Submitted (MAR-2020) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|RefSeq:XP_018858454.1}
RP IDENTIFICATION.
RC TISSUE=Leaves {ECO:0000313|RefSeq:XP_018858454.1};
RG RefSeq;
RL Submitted (NOV-2023) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the HOP2 family.
CC {ECO:0000256|ARBA:ARBA00007922}.
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DR EMBL; LIHL02000006; KAF5467638.1; -; Genomic_DNA.
DR RefSeq; XP_018858454.1; XM_019002909.2.
DR STRING; 51240.A0A2I4HQN0; -.
DR EnsemblPlants; Jr06_00690_p1; cds.Jr06_00690_p1; Jr06_00690.
DR GeneID; 109020449; -.
DR Gramene; Jr06_00690_p1; cds.Jr06_00690_p1; Jr06_00690.
DR KEGG; jre:109020449; -.
DR OrthoDB; 25380at2759; -.
DR Proteomes; UP000235220; Chromosome 6.
DR Proteomes; UP000619265; Unassembled WGS sequence.
DR GO; GO:0000794; C:condensed nuclear chromosome; IBA:GO_Central.
DR GO; GO:0120231; C:DNA recombinase auxiliary factor complex; IBA:GO_Central.
DR GO; GO:0003690; F:double-stranded DNA binding; IBA:GO_Central.
DR GO; GO:0120230; F:recombinase activator activity; IBA:GO_Central.
DR GO; GO:0051026; P:chiasma assembly; IEA:EnsemblPlants.
DR GO; GO:0007129; P:homologous chromosome pairing at meiosis; IBA:GO_Central.
DR GO; GO:0000709; P:meiotic joint molecule formation; IBA:GO_Central.
DR GO; GO:0010774; P:meiotic strand invasion involved in reciprocal meiotic recombination; IBA:GO_Central.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR010776; Hop2_WH_dom.
DR InterPro; IPR040661; LZ3wCH.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR15938:SF0; HOMOLOGOUS-PAIRING PROTEIN 2 HOMOLOG; 1.
DR PANTHER; PTHR15938; TBP-1 INTERACTING PROTEIN; 1.
DR Pfam; PF18517; LZ3wCH; 1.
DR Pfam; PF07106; TBPIP; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|ARBA:ARBA00023054, ECO:0000256|SAM:Coils};
KW Meiosis {ECO:0000256|ARBA:ARBA00023254};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000235220}.
FT DOMAIN 9..69
FT /note="Homologous-pairing protein 2 winged helix"
FT /evidence="ECO:0000259|Pfam:PF07106"
FT DOMAIN 150..207
FT /note="Leucine zipper with capping helix"
FT /evidence="ECO:0000259|Pfam:PF18517"
FT COILED 78..146
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 227 AA; 26526 MW; 5FDD724AA9D7A13E CRC64;
MAPKSDSSAE GIVLNFVNEQ NRPLNSQNVA DFLQKFNLKK AAVQKALDTL ADTGRISFKE
YGKQKIYIAR QDQFDIPNNE ELNRMKEENA SLQQQLQEQR KAIGEVEGEI RTLQSNLTLE
QIWDRETKLR KEVKEMEDKL EKLRGGVTLV RPEDRKAIEN MYSEKLSQWR RRKRMFKDVW
DAITENSPKD LKEFKEELGI EYDEDVGVNL QSNSDLLQHG KKRPRGQ
//
