ID A0A2I4HSG4_JUGRE Unreviewed; 932 AA.
AC A0A2I4HSG4;
DT 28-FEB-2018, integrated into UniProtKB/TrEMBL.
DT 28-FEB-2018, sequence version 1.
DT 27-MAR-2024, entry version 28.
DE SubName: Full=Zinc finger CCCH domain-containing protein 38 {ECO:0000313|RefSeq:XP_018859088.1, ECO:0000313|RefSeq:XP_018859090.1};
GN Name=LOC109021004 {ECO:0000313|RefSeq:XP_018859088.1,
GN ECO:0000313|RefSeq:XP_018859090.1, ECO:0000313|RefSeq:XP_018859091.1};
GN ORFNames=F2P56_001406 {ECO:0000313|EMBL:KAF5480673.1};
OS Juglans regia (English walnut).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fagales; Juglandaceae; Juglans.
OX NCBI_TaxID=51240 {ECO:0000313|Proteomes:UP000235220, ECO:0000313|RefSeq:XP_018859090.1};
RN [1] {ECO:0000313|EMBL:KAF5480673.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaves {ECO:0000313|EMBL:KAF5480673.1};
RA Martinez-Garcia P.J., Crepeau M.W., Puiu D., Gonzalez-Ibeas D., Whalen J.,
RA Stevens K., Paul R., Butterfield T., Britton M., Reagan R., Chakraborty S.,
RA Walawage S.L., Vasquez-Gross H.A., Cardeno C., Famula R., Pratt K.,
RA Kuruganti S., Aradhya M.K., Leslie C.A., Dandekar A.M., Salzberg S.L.,
RA Wegrzyn J.L., Langley C.H., Neale D.B.;
RL Submitted (OCT-2015) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:KAF5480673.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaves {ECO:0000313|EMBL:KAF5480673.1};
RA Marrano A., Britton M., Zimin A.V., Zaini P.A., Workman R., Puiu D.,
RA Bianco L., Allen B.J., Troggio M., Leslie C.A., Timp W., Dendekar A.,
RA Salzberg S.L., Neale D.B.;
RT "Walnut 2.0.";
RL Submitted (MAR-2020) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|RefSeq:XP_018859088.1, ECO:0000313|RefSeq:XP_018859090.1}
RP IDENTIFICATION.
RC TISSUE=Leaves {ECO:0000313|RefSeq:XP_018859088.1,
RC ECO:0000313|RefSeq:XP_018859090.1};
RG RefSeq;
RL Submitted (NOV-2023) to UniProtKB.
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DR EMBL; LIHL02000001; KAF5480673.1; -; Genomic_DNA.
DR RefSeq; XP_018859088.1; XM_019003543.2.
DR RefSeq; XP_018859089.1; XM_019003544.1.
DR RefSeq; XP_018859090.1; XM_019003545.2.
DR RefSeq; XP_018859091.1; XM_019003546.2.
DR STRING; 51240.A0A2I4HSG4; -.
DR EnsemblPlants; Jr01_15090_p1; cds.Jr01_15090_p1; Jr01_15090.
DR GeneID; 109021004; -.
DR Gramene; Jr01_15090_p1; cds.Jr01_15090_p1; Jr01_15090.
DR KEGG; jre:109021004; -.
DR OrthoDB; 450788at2759; -.
DR Proteomes; UP000235220; Chromosome 1.
DR Proteomes; UP000619265; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR Gene3D; 2.30.30.1190; -; 1.
DR Gene3D; 4.10.1000.10; Zinc finger, CCCH-type; 2.
DR InterPro; IPR000571; Znf_CCCH.
DR InterPro; IPR036855; Znf_CCCH_sf.
DR PANTHER; PTHR36886; PROTEIN FRIGIDA-ESSENTIAL 1; 1.
DR PANTHER; PTHR36886:SF8; ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 38; 1.
DR Pfam; PF00642; zf-CCCH; 1.
DR Pfam; PF14608; zf-CCCH_2; 2.
DR SMART; SM00356; ZnF_C3H1; 3.
DR SUPFAM; SSF90229; CCCH zinc finger; 2.
DR PROSITE; PS50103; ZF_C3H1; 3.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723, ECO:0000256|PROSITE-
KW ProRule:PRU00723}; Reference proteome {ECO:0000313|Proteomes:UP000235220};
KW Zinc {ECO:0000256|ARBA:ARBA00022833, ECO:0000256|PROSITE-ProRule:PRU00723};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00723}.
FT DOMAIN 186..213
FT /note="C3H1-type"
FT /evidence="ECO:0000259|PROSITE:PS50103"
FT DOMAIN 246..273
FT /note="C3H1-type"
FT /evidence="ECO:0000259|PROSITE:PS50103"
FT DOMAIN 309..336
FT /note="C3H1-type"
FT /evidence="ECO:0000259|PROSITE:PS50103"
FT ZN_FING 186..213
FT /note="C3H1-type"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00723"
FT ZN_FING 246..273
FT /note="C3H1-type"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00723"
FT ZN_FING 309..336
FT /note="C3H1-type"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00723"
FT REGION 1..99
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 120..188
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 213..238
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 277..311
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 723..850
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 8..27
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 50..64
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 143..163
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 168..182
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 281..311
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 730..744
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 766..798
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 808..850
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 932 AA; 102527 MW; FA5B6F018D94C931 CRC64;
MSGSSRRRSS KWDLREEERH FESENVQDDS WPGKAGTYHD KELETGWLSP GVAGNNNSKW
SDVEANDLLK SKRDAGLASG EPLPRSRGSI KDHSYNRGRN RNLESNVAWD GDGSYSTRMS
PGLDEWRGPS HSPSPKNVWS RSLRGRSRSR SRSRSRSRSR SLSRSRSPVR GIRRESGFHD
RSRSRGASTQ LCRDFTAGRC RRGNHCHFLH QGNQHHEDNW ESRHRKDGDS KYSTTHDTRD
YTSRIGRSTP YCTDFVRGKC RRGASCRYAH DGASDSFDKV SGNDAIRERE NRRNRDASFE
RGGEPEHRRG GDVPCKFFAA GNCRNGKYCR FSHHSQADLS PDGRSRGDRW GLGRNSDDVD
RLWDGPKLSE WSNTVTVSDT TKSEDKSGKL GAPVARLPRW SIDDTRWGHG MDKEKKSCGD
PAVDKAVENN EKAGHLWMEE NAGASIGISE SRGAEKWLGD MDMSPDWNYG VQSANHAVKE
EHGQITQAPQ SLGSYDPSLM ARGQDITKEA SVQFHGAAAT VQPIINEKSY FKQNHNLMGD
GANVVSCDDK IAVEKTVSSS ADLNVSANIM PGQCFNQNGR SLSSLPLSNM IVVGQNQVVT
PNAPLRGGSG TIKYQQNLAF SSEGKPLIQP DIGDDSALQV NPGIPPSQNV VSGEQLTKLT
NLSASLAQFF GDRKQLPQLY AALNSHNSSD ISSFTNPEVP LQPVLAAHVQ TDQAIRSQQY
DPICDGVESK KPGSSNNPPG LKSNSLGPKS AVDGKPELPL KNLSPSSFPV GPNDTDLPRT
GSSEEPNQKS QQSNKLDTGA HGEAMENNGG GTEERKQAQE ENQKEQEDCP SGNADGDAGE
DEGKKSKDAK GIRAFKFALV EFVKELLKPT WKEGQISKDA YKTIVKKVVD KVTGGQGANI
PQTQERIDHY LSSSKPKLTK LVQAYVEKTQ KG
//
