ID A0A2J6JN80_LACSA Unreviewed; 2460 AA.
AC A0A2J6JN80;
DT 28-MAR-2018, integrated into UniProtKB/TrEMBL.
DT 28-MAR-2018, sequence version 1.
DT 27-MAR-2024, entry version 21.
DE RecName: Full=AAA+ ATPase domain-containing protein {ECO:0000259|SMART:SM00382};
GN ORFNames=LSAT_7X1960 {ECO:0000313|EMBL:PLY64256.1};
OS Lactuca sativa (Garden lettuce).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; campanulids; Asterales; Asteraceae; Cichorioideae; Cichorieae;
OC Lactucinae; Lactuca.
OX NCBI_TaxID=4236 {ECO:0000313|EMBL:PLY64256.1};
RN [1] {ECO:0000313|EMBL:PLY64256.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=28401891; DOI=10.1038/ncomms14953;
RA Reyes-Chin-Wo S., Wang Z., Yang X., Kozik A., Arikit S., Song C., Xia L.,
RA Froenicke L., Lavelle D.O., Truco M.J., Xia R., Zhu S., Xu C., Xu H.,
RA Xu X., Cox K., Korf I., Meyers B.C., Michelmore R.W.;
RT "Genome assembly with in vitro proximity ligation data and whole-genome
RT triplication in lettuce.";
RL Nat. Commun. 8:14953-14953(2017).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PLY64256.1}.
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DR EMBL; NBSK01010665; PLY64256.1; -; Genomic_DNA.
DR STRING; 4236.A0A2J6JN80; -.
DR EnsemblPlants; rna-gnl|WGS:NBSK|LSAT_7X1960_mrna; cds-PLY64256.1; gene-LSAT_7X1960.
DR Gramene; rna-gnl|WGS:NBSK|LSAT_7X1960_mrna; cds-PLY64256.1; gene-LSAT_7X1960.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0030687; C:preribosome, large subunit precursor; IBA:GO_Central.
DR GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0000055; P:ribosomal large subunit export from nucleus; IBA:GO_Central.
DR CDD; cd00009; AAA; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 4.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR040848; AAA_lid_7.
DR InterPro; IPR011704; ATPase_dyneun-rel_AAA.
DR InterPro; IPR041190; Midasin_AAA_lid_5.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR025662; Sigma_54_int_dom_ATP-bd_1.
DR PANTHER; PTHR48103:SF2; MIDASIN; 1.
DR PANTHER; PTHR48103; MIDASIN-RELATED; 1.
DR Pfam; PF07728; AAA_5; 5.
DR Pfam; PF17865; AAA_lid_5; 1.
DR Pfam; PF17867; AAA_lid_7; 2.
DR SMART; SM00382; AAA; 3.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 4.
DR PROSITE; PS00675; SIGMA54_INTERACT_1; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Chaperone {ECO:0000256|ARBA:ARBA00023186};
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242}.
FT DOMAIN 411..632
FT /note="AAA+ ATPase"
FT /evidence="ECO:0000259|SMART:SM00382"
FT DOMAIN 691..939
FT /note="AAA+ ATPase"
FT /evidence="ECO:0000259|SMART:SM00382"
FT DOMAIN 1093..1238
FT /note="AAA+ ATPase"
FT /evidence="ECO:0000259|SMART:SM00382"
FT COILED 1768..1795
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 2460 AA; 278544 MW; 90193B22C97BA303 CRC64;
MAIDGSFGVE YELQRFLLRC PKLAAAPQLD NLVEKGKILT EKELIDGVAE LLLHPRYTIP
LLGCFRPIAR KVVDRVVALL HLVPDLTSNS NDSMIEFDDG RLFKDNESSD YEQDISVINL
YVKYGRGLGL HELSCLAFSR TLDMLPYLTG SVKDYFKFAP PPFKRMMEKE SMAQSLSLVQ
PGTHLLDAVQ VSYRLLLAEP EVFAKLWDWS CYMDLIHEIT SLNNGENTEI LMDIRWCAVQ
TLTMVLNMSD KFIRKSKTSD LATSDFGFDD EKAYGCLLRW KEFLQDVSLE KAGWYLEPFG
ENTSVGQPNW SNMEAKWDTL KTGSPFVLTS AVKKSFEMVL LAVSQRWPVL LYGPAGAGKT
ALISRLAQGH GSQVLSIHMD EQIDGKTLIG SYVCAEQPGE FRWQPGSLTQ VSYXVLLYGP
AGAGKTALIS RLAQGHGSQV LSIHMDEQID GKTLIGTYVC AEQPGEFRWQ PGSLTQAIRV
SESFRLFSTV SSSRLDASSM TTGRNSLGAL WRRVMIGSSS SSDLESILKA WYPDLESLCG
KLIETFEKVN HLTGFQLGTC VTLSSAGRDL LKWCKIIAGL GFHFMGERLS GHVAKCIYQE
AVDVFATSSS SVEARMRIMR ELAEIWGIPI SDAETLFPVD KPDIQDLRSD IRIGRVTLQL
TRIPSSSVNK SFVEIRTSMH ILERIAGSVK YNEPVLLVGE TGTGKTTLVQ NLAARLGQKL
TVLNLSQQSD VADLLGGFKP MNAQFLCLPL YQEFENLFRS TFSSKDKENF LAILRKSVSG
KNWNVLFSGL QKGVRTVVKI GKQKPGVKRK RPLGEKLIKS WEKFSLKLEA AHGQINASDG
MVFSFVEGVF ITALKNGDWI LLDEINLAPP ETLQRVIGVL EDEGGSLCLA ERGDVDYISR
HPNFRIFACM NPATDAGKRD LPLFLRNRFT EYFMDDVLED EDLKLFINRF MEAADNSVKD
ITTKILKFYK IAKKESEERL QDGANQKPQY SLRSVYRAME YTKKARRAFG FLKAIYDGFS
MFFLTMLDPP SANLMKKLIT GYLLDGKDPT HVSFDRYIVV GKNTKNDEFL ENYVLTKSVR
DQLSNLACAI FIGRYPVLLQ GPTSSGKTSL VQYLAAITGH EFVRINNHEH TDLQEYLGSY
ITDASGRLVF QEGVLVKAVR NGHWIVLDEL NLAPSDVLEA LNRLLDDNRE LYVPELCETI
HAHPDFMLFA TQNPPTFYGG RKMLSRAFRN RFVEIHVDEI PQDELSTILE NRCKIPGSYA
KKMIEVMIDL QKHRQSSKVF AGKHGYITPR DLFRWADRFR MFGKSYEDLG RDGYYLFVLD
RINSLVEQSG SITVNECGTI EGKPMVLHPH PQFRMFLTVN PTYGEVSRAM RNRGVEIYMM
QPYGENELID VKRFLALSDI PGEHLVNAMA KAHLSAKRDG LKHNVSISNL ELMRWVQLFQ
RLVTNGNQAT WSLKISFEHT YLSSLGEIEG KDIINEAISC YLSTQELHNC SSLCLPGGWP
TTLNVRDFVW YSRETSVKQN CMYLEYLAAQ MASHSFRASF GRMDNVLCPS DSMRAYLVDL
ETLHAMTFPK ADVAGLDKVN QTELDFAFMN KRLLFAANWT MEQATESDLK LYLGDHLNRH
CSFFSSFRKL LEKELDHSIW NCIRTSHGAQ YSSPMLSLDF GKSTPSESES NSRNLSNAVK
CVGLLRVSYQ QWHNESEFKY SEQTRCFIPV LQSLKRLEER ILDMLVESPF FDVLFVLYKE
LINDHLSAWN GLVSCQYDCM LISWRSLVKD AKKLKEFCAN EVENFQNEMK NLERVLSWSL
SSQRSLLWAY GGHPYSPSSV EIYRKQQQLV NLCHSIWTKN INLQELAHKG YIEAAVATNP
ELRFLAMQGV CMSAFIMSKV DEDDHDVLNQ LEEMYQVLSS KFHYEKDKME RNAGTNDKAS
LFGALSSCCT MNPDMLCLPS GFNCWLDTLP LNDNNSFGLD MRLLQELSNI ITLDGKDLES
GLSRLRWLLE STLKFSLNSS SRPPTDFSPY QKISWVLEAW TSVNNAHASI SSTVLEMWFN
WHTSLWKHHS NREKKNSSQH GNADLVPDML FQPVATLALD KILGNPIGIK DLNAHSLKLG
VASRNLWLSS PHVADSHSFF LSSARSLFQQ IILAHERSFE ADKYSLIKSI FFSAQQADVR
VIISLLASST HHVLKSLIRP FIEPLLHALY VKNSADSLFD LGCAWLHIGG LRYHLLLCCD
DVDPAVKKNL KYFQLTERIA SLELDIEVRK ECVQLAGCFS LSEADKEKTE LLNDLKAERN
RLQKQVVFRS DPRKFKKLRS ECDEFMKLVA TPFDLLKNIG NLSMQGVADQ VHNWQETATR
FVDRLSNEYS EYVDIVQPVQ IAIYEMKLGL SLVLSNSLRD QFLDRVGQKD IDVVLGAIYS
FMRFPRGISG KDDSCVDDSF HVKLSSFDKA FPTYIGEADV AMVETLVTSA KDNNSDEVVC
//
