ID A0A2J6K9K0_LACSA Unreviewed; 591 AA.
AC A0A2J6K9K0;
DT 28-MAR-2018, integrated into UniProtKB/TrEMBL.
DT 28-MAR-2018, sequence version 1.
DT 24-JAN-2024, entry version 22.
DE RecName: Full=CTLH domain-containing protein {ECO:0000259|PROSITE:PS50897};
GN ORFNames=LSAT_3X36081 {ECO:0000313|EMBL:PLY71738.1};
OS Lactuca sativa (Garden lettuce).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; campanulids; Asterales; Asteraceae; Cichorioideae; Cichorieae;
OC Lactucinae; Lactuca.
OX NCBI_TaxID=4236 {ECO:0000313|EMBL:PLY71738.1};
RN [1] {ECO:0000313|EMBL:PLY71738.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=28401891; DOI=10.1038/ncomms14953;
RA Reyes-Chin-Wo S., Wang Z., Yang X., Kozik A., Arikit S., Song C., Xia L.,
RA Froenicke L., Lavelle D.O., Truco M.J., Xia R., Zhu S., Xu C., Xu H.,
RA Xu X., Cox K., Korf I., Meyers B.C., Michelmore R.W.;
RT "Genome assembly with in vitro proximity ligation data and whole-genome
RT triplication in lettuce.";
RL Nat. Commun. 8:14953-14953(2017).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PLY71738.1}.
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DR EMBL; NBSK01008225; PLY71738.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2J6K9K0; -.
DR STRING; 4236.A0A2J6K9K0; -.
DR EnsemblPlants; rna-gnl|WGS:NBSK|LSAT_3X36081_mrna; cds-PLY71738.1; gene-LSAT_3X36081.
DR Gramene; rna-gnl|WGS:NBSK|LSAT_3X36081_mrna; cds-PLY71738.1; gene-LSAT_3X36081.
DR OrthoDB; 5491841at2759; -.
DR CDD; cd00200; WD40; 1.
DR Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 2.
DR InterPro; IPR006595; CTLH_C.
DR InterPro; IPR020472; G-protein_beta_WD-40_rep.
DR InterPro; IPR006594; LisH.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR019775; WD40_repeat_CS.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR InterPro; IPR001680; WD40_rpt.
DR PANTHER; PTHR22838; WD REPEAT PROTEIN 26-RELATED; 1.
DR PANTHER; PTHR22838:SF0; WD REPEAT-CONTAINING PROTEIN 26; 1.
DR Pfam; PF00400; WD40; 5.
DR PRINTS; PR00320; GPROTEINBRPT.
DR SMART; SM00667; LisH; 1.
DR SMART; SM00320; WD40; 7.
DR SUPFAM; SSF50978; WD40 repeat-like; 1.
DR PROSITE; PS50897; CTLH; 1.
DR PROSITE; PS50896; LISH; 1.
DR PROSITE; PS00678; WD_REPEATS_1; 1.
DR PROSITE; PS50082; WD_REPEATS_2; 4.
DR PROSITE; PS50294; WD_REPEATS_REGION; 3.
PE 4: Predicted;
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW WD repeat {ECO:0000256|ARBA:ARBA00022574, ECO:0000256|PROSITE-
KW ProRule:PRU00221}.
FT DOMAIN 103..153
FT /note="CTLH"
FT /evidence="ECO:0000259|PROSITE:PS50897"
FT REPEAT 269..303
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 314..355
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 499..525
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 526..561
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REGION 1..26
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..19
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 591 AA; 65828 MW; 9FB68ECB2EE0FE7A CRC64;
MGGIEDDEPP SKRVKASSKE QRGLSNGKFL EKPANHSFAA SMARPLALTS QGDDEVIGTK
GVKKVEFVRI IAEALYSLGY SKTGACLEEE SGIPFHSSTV TVFIQQILDG NWDGSLSSLH
KIGIVEESVI KSASFMILQQ KFFELLDHGK LMEALKTLRT EISPLEINSN RVRELSSFIL
SPAYRIIDGV SGQGMVKLKP RSQLLEDLQK LFPPTVMIPD RRLLQLVEQA LDLQREACLF
HNSSVGETSL FTDHHCGRDQ IPSQTVQILQ DHNDEVWYLQ FSQNGKYLAS SSSDNSAIIW
EVDLDGKLSL KHRLIGHQKS VSCVSWSPND DQILTCGLEE VVRRWDVSSG ECLQVYEKGL
IGLISCNWSP DGKCVFSGLT DKSIIMWGLD GKEIESLKGQ KTIRISDIQL TSDGKLIVTI
CKETMILLID RESRNERCIE EDQMIVSFTL SKDNKYLLVS LVNEELHLWN IQGHIRLVAK
YKGHRRSRFI VRACFGGLDQ SFIASGSEDS QVYIWHRGSG ELIETLEGHS GAVNCISWNP
ANPHMLASAS DDRSIRIWGL KQLHVKQKGK GKLVSGNENG NGVHYCNGAT T
//
