ID A0A2J6KDL8_LACSA Unreviewed; 500 AA.
AC A0A2J6KDL8;
DT 28-MAR-2018, integrated into UniProtKB/TrEMBL.
DT 28-MAR-2018, sequence version 1.
DT 13-SEP-2023, entry version 18.
DE RecName: Full=Zinc finger CCCH domain-containing protein 18 {ECO:0008006|Google:ProtNLM};
GN ORFNames=LSAT_6X78060 {ECO:0000313|EMBL:PLY73169.1};
OS Lactuca sativa (Garden lettuce).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; campanulids; Asterales; Asteraceae; Cichorioideae; Cichorieae;
OC Lactucinae; Lactuca.
OX NCBI_TaxID=4236 {ECO:0000313|EMBL:PLY73169.1};
RN [1] {ECO:0000313|EMBL:PLY73169.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=28401891; DOI=10.1038/ncomms14953;
RA Reyes-Chin-Wo S., Wang Z., Yang X., Kozik A., Arikit S., Song C., Xia L.,
RA Froenicke L., Lavelle D.O., Truco M.J., Xia R., Zhu S., Xu C., Xu H.,
RA Xu X., Cox K., Korf I., Meyers B.C., Michelmore R.W.;
RT "Genome assembly with in vitro proximity ligation data and whole-genome
RT triplication in lettuce.";
RL Nat. Commun. 8:14953-14953(2017).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PLY73169.1}.
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DR EMBL; NBSK01007833; PLY73169.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2J6KDL8; -.
DR STRING; 4236.A0A2J6KDL8; -.
DR EnsemblPlants; rna-gnl|WGS:NBSK|LSAT_6X78060_mrna; cds-PLY73169.1; gene-LSAT_6X78060.
DR Gramene; rna-gnl|WGS:NBSK|LSAT_6X78060_mrna; cds-PLY73169.1; gene-LSAT_6X78060.
DR OrthoDB; 3060898at2759; -.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR Gene3D; 2.30.30.1190; -; 1.
DR InterPro; IPR000467; G_patch_dom.
DR InterPro; IPR000571; Znf_CCCH.
DR PANTHER; PTHR47650; ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 22; 1.
DR PANTHER; PTHR47650:SF2; ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 22; 1.
DR Pfam; PF01585; G-patch; 1.
DR SMART; SM00443; G_patch; 1.
DR PROSITE; PS50174; G_PATCH; 1.
DR PROSITE; PS50103; ZF_C3H1; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00723};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00723};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00723}.
FT DOMAIN 149..176
FT /note="C3H1-type"
FT /evidence="ECO:0000259|PROSITE:PS50103"
FT DOMAIN 306..352
FT /note="G-patch"
FT /evidence="ECO:0000259|PROSITE:PS50174"
FT ZN_FING 149..176
FT /note="C3H1-type"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00723"
FT REGION 79..103
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 350..375
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 2..31
FT /evidence="ECO:0000256|SAM:Coils"
FT COILED 429..480
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 500 AA; 55904 MW; 33697965571098AF CRC64;
MADDAERRLL EDQLELQLQE QRESIVALDE ALASDPQNPE ILEVHAELLQ AIKDAEEGLF
VLKRARLLQE VDILQKTKEG DKGLNQNPVD SKHKEVEADD TNQSKEVEVE YSIGSKCRFR
HSDGRWYNGL IVALEGCNDA KVCFLTPTSE NQLMCKFFLQ QRCRFGSKCR SSHGIDLPLS
SLKKYTPTKW NQSLVGSNVW ATSEGKIGIW REAELESWDD ELGSGRVVFR DNGTASNVGI
ESLSLSEYAQ MSDEYNTDSY SESDSDYENE DTSEGLGLGL GFLESSNLQR GIQTETAIFA
KWENHTRGMA SKMMANMGFR EGMGLGVNGQ GRVDPISVKV LPPKKSLDYA LESVQNKDSQ
EKKRSRGGKR KRDKKFAAAV RAAKEVEEPV SDIFSLINTQ LAGKEGFSGK KAAEKKDVPG
GKNGERRALV AFDDEVKELR GRVEKLEEMA RRNKKEKVVY EAAVRKLDET RRSLAAVEAA
QASASNAVAS KEKEKRWLKF
//
