ID A0A2J6KFA6_LACSA Unreviewed; 666 AA.
AC A0A2J6KFA6;
DT 28-MAR-2018, integrated into UniProtKB/TrEMBL.
DT 28-MAR-2018, sequence version 1.
DT 08-NOV-2023, entry version 25.
DE RecName: Full=SET domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=LSAT_2X41661 {ECO:0000313|EMBL:PLY73750.1};
OS Lactuca sativa (Garden lettuce).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; campanulids; Asterales; Asteraceae; Cichorioideae; Cichorieae;
OC Lactucinae; Lactuca.
OX NCBI_TaxID=4236 {ECO:0000313|EMBL:PLY73750.1};
RN [1] {ECO:0000313|EMBL:PLY73750.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=28401891; DOI=10.1038/ncomms14953;
RA Reyes-Chin-Wo S., Wang Z., Yang X., Kozik A., Arikit S., Song C., Xia L.,
RA Froenicke L., Lavelle D.O., Truco M.J., Xia R., Zhu S., Xu C., Xu H.,
RA Xu X., Cox K., Korf I., Meyers B.C., Michelmore R.W.;
RT "Genome assembly with in vitro proximity ligation data and whole-genome
RT triplication in lettuce.";
RL Nat. Commun. 8:14953-14953(2017).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|PROSITE-ProRule:PRU00358}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PLY73750.1}.
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DR EMBL; NBSK01007579; PLY73750.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2J6KFA6; -.
DR STRING; 4236.A0A2J6KFA6; -.
DR EnsemblPlants; rna-gnl|WGS:NBSK|LSAT_2X41661_mrna; cds-PLY73750.1; gene-LSAT_2X41661.
DR Gramene; rna-gnl|WGS:NBSK|LSAT_2X41661_mrna; cds-PLY73750.1; gene-LSAT_2X41661.
DR OrthoDB; 5481936at2759; -.
DR GO; GO:0005694; C:chromosome; IEA:UniProtKB-KW.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003690; F:double-stranded DNA binding; IBA:GO_Central.
DR GO; GO:0042054; F:histone methyltransferase activity; IBA:GO_Central.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR Gene3D; 2.170.270.10; SET domain; 1.
DR Gene3D; 2.30.280.10; SRA-YDG; 1.
DR InterPro; IPR025794; H3-K9-MeTrfase_plant.
DR InterPro; IPR007728; Pre-SET_dom.
DR InterPro; IPR015947; PUA-like_sf.
DR InterPro; IPR001214; SET_dom.
DR InterPro; IPR046341; SET_dom_sf.
DR InterPro; IPR036987; SRA-YDG_sf.
DR InterPro; IPR003105; SRA_YDG.
DR PANTHER; PTHR45660; HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR; 1.
DR PANTHER; PTHR45660:SF74; SRA-YDG-RELATED; 1.
DR Pfam; PF05033; Pre-SET; 1.
DR Pfam; PF02182; SAD_SRA; 1.
DR Pfam; PF00856; SET; 1.
DR SMART; SM00468; PreSET; 1.
DR SMART; SM00317; SET; 1.
DR SMART; SM00466; SRA; 1.
DR SUPFAM; SSF88697; PUA domain-like; 1.
DR SUPFAM; SSF82199; SET domain; 1.
DR PROSITE; PS50867; PRE_SET; 1.
DR PROSITE; PS51575; SAM_MT43_SUVAR39_2; 1.
DR PROSITE; PS50280; SET; 1.
DR PROSITE; PS51015; YDG; 1.
PE 4: Predicted;
KW Chromosome {ECO:0000256|ARBA:ARBA00022454};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242, ECO:0000256|PROSITE-
KW ProRule:PRU00358}.
FT DOMAIN 225..372
FT /note="YDG"
FT /evidence="ECO:0000259|PROSITE:PS51015"
FT DOMAIN 449..507
FT /note="Pre-SET"
FT /evidence="ECO:0000259|PROSITE:PS50867"
FT DOMAIN 510..653
FT /note="SET"
FT /evidence="ECO:0000259|PROSITE:PS50280"
SQ SEQUENCE 666 AA; 75033 MW; CEE87898F5820076 CRC64;
MGSLIDLNLY PDSPVRDTPD VTAGNLREAT TFLTLNIPKL EPKEEPLDEP PQPHHHSHIN
YANPNINFTH LDTSQPVEQP AGVENDVYSE FSRIQEMFRT AFSNNTEKHD AAGFIDPDAQ
AIVPVPEENQ HSAVGDSSRR KYQQRSGELV RVTNLGVEDE RYFRDVVRKT RMLYDSLRVF
VTMEDEKRRS HQVFGRIPRA RGDLKASSVM KDRGLWLNRD KRIVGAIPGV YIGDIFFFRM
ELCVVGMHGL PQAGIDYLTS SQSSNGDPIA TSIIVSGGYE DDQDAGDVII YTGHGGQDKY
SRQADHQRLE GGNLAMERSM HYGIEVRVVR GFRYEGSPSG KVYVYDGLYK VIDSWLEIGK
SGFGVIKFKL IRMENQPEMG SAILKYAQDL RNGQIKPVGY VHTDMSMKKE KLPVLLFNDI
DNNHDPMFYE YLSTSVFPPF VYHLGGKGHG CNCVSGCLDD CVCAAKNGGE FAYDQNGLLV
RGKPLIFECG PHCGCSATCR NRVSQNGIKN RFEVFRSRET GWGVRSLDLI QAGSFICEYT
GVILTREQAQ LFTMNGDNLV YPNRFGERWA EWGDLGQIFS DYTRPSYPSV PPLDFAMDVS
RMRNVACYMS HSSCPNVLVQ LVLYDHSNFA FPHLMLFAME NIPPMRELSL DYGEADEWTG
KLAICN
//
