ID A0A2J6KRJ4_LACSA Unreviewed; 881 AA.
AC A0A2J6KRJ4;
DT 28-MAR-2018, integrated into UniProtKB/TrEMBL.
DT 28-MAR-2018, sequence version 1.
DT 27-MAR-2024, entry version 26.
DE RecName: Full=CW-type domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=LSAT_9X13800 {ECO:0000313|EMBL:PLY77701.1};
OS Lactuca sativa (Garden lettuce).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; campanulids; Asterales; Asteraceae; Cichorioideae; Cichorieae;
OC Lactucinae; Lactuca.
OX NCBI_TaxID=4236 {ECO:0000313|EMBL:PLY77701.1};
RN [1] {ECO:0000313|EMBL:PLY77701.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=28401891; DOI=10.1038/ncomms14953;
RA Reyes-Chin-Wo S., Wang Z., Yang X., Kozik A., Arikit S., Song C., Xia L.,
RA Froenicke L., Lavelle D.O., Truco M.J., Xia R., Zhu S., Xu C., Xu H.,
RA Xu X., Cox K., Korf I., Meyers B.C., Michelmore R.W.;
RT "Genome assembly with in vitro proximity ligation data and whole-genome
RT triplication in lettuce.";
RL Nat. Commun. 8:14953-14953(2017).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PLY77701.1}.
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DR EMBL; NBSK01006322; PLY77701.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2J6KRJ4; -.
DR STRING; 4236.A0A2J6KRJ4; -.
DR EnsemblPlants; rna-gnl|WGS:NBSK|LSAT_9X13800_mrna; cds-PLY77701.1; gene-LSAT_9X13800.
DR Gramene; rna-gnl|WGS:NBSK|LSAT_9X13800_mrna; cds-PLY77701.1; gene-LSAT_9X13800.
DR OrthoDB; 933627at2759; -.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd10017; B3_DNA; 1.
DR Gene3D; 3.30.40.100; -; 1.
DR Gene3D; 2.40.330.10; DNA-binding pseudobarrel domain; 1.
DR Gene3D; 3.30.50.10; Erythroid Transcription Factor GATA-1, subunit A; 1.
DR InterPro; IPR003340; B3_DNA-bd.
DR InterPro; IPR015300; DNA-bd_pseudobarrel_sf.
DR InterPro; IPR011124; Znf_CW.
DR InterPro; IPR013088; Znf_NHR/GATA.
DR PANTHER; PTHR46245; B3 DOMAIN-CONTAINING PROTEIN OS07G0563300; 1.
DR PANTHER; PTHR46245:SF3; B3 DOMAIN-CONTAINING TRANSCRIPTION REPRESSOR VAL1; 1.
DR Pfam; PF02362; B3; 1.
DR Pfam; PF07496; zf-CW; 1.
DR SMART; SM01019; B3; 1.
DR SUPFAM; SSF101936; DNA-binding pseudobarrel domain; 1.
DR PROSITE; PS50863; B3; 1.
DR PROSITE; PS51050; ZF_CW; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771}.
FT DOMAIN 341..442
FT /note="TF-B3"
FT /evidence="ECO:0000259|PROSITE:PS50863"
FT DOMAIN 572..622
FT /note="CW-type"
FT /evidence="ECO:0000259|PROSITE:PS51050"
FT REGION 222..312
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 222..252
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 267..294
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 881 AA; 96383 MW; 1BECD5587A20B1F4 CRC64;
MSSSKVCMNG LCGAKTTPQW KRGWPMKAGG FATLCYTCGI AYENVTYCER FHLNEPGWRE
CKFCEKPVHC GCVVSKYLHE CLDLGGISCI KCIRARGTQA LKPIQSYPTD IPNGFIPFSA
TWHSSVIGNR INGGASLEKG KLTQLSESIE KHHRQPSPST PSLTHQIKQD ENRLSSNKEL
NTIFPSASSL FGTPDHHNNS GRTDLGLKAL YEAIPPQPSL SYSLGNNNNA LTTTTKPSNA
NANANVSSSD GRETEKVAGF KQGQRSRVTF PKPSKTGTGS SNSQRSQSNK GAVSENRVAR
PPAEGRGRNQ LLPRYWPKIT DQELLQISGD LNSNCTITPL FEKVLSASDA GRIGRLVLPK
ACAEAYFPAI NQSEGLPIRI QDIKGKEWTF QFRFWPNNNS RMYVLEGVTP CIQNMQLQAG
DTVIFSRLDP GEKLVIGCRK ATISAEIQEG ETAAVNGVAG GTSGGNGNVA TKNMEQEGMG
NGDSAQVQRG AVVNVIQEKN KKTRNIGSKN KRLLMHNEDA MELKVTWEEA HELLRPPPTS
KPTLSMIENC EFEEYDEPPV FGKKTVFTSH ASGSQEQWGQ CDSCSKWRKL PPDVLLPSKW
TCSDNVWDPD RCSCSVPDEI NTRDLERIFK LGKDMKKRKH PEGRAVEEQE PSGLDALATA
AVLGESEFGE SSAAGPTTRH PRHRPGCTCI VCIQPPSGKG KHKPNCFCNV CLTVKRRFKT
LMLRKKKRLS DREAEVAQKA LAASLNNGIG ISEQNGNGNG IEVEVEVGES SSKGGGQRLD
LNCDPDKEEE MTPVATSNNN NNASALTIEW ERLLEVLVPC SQPPPKATTE MEVCPPAPVE
IKVEGQPSSL AATDETPVPL PLVDVVEVEV EMEEKLVEED R
//
