ID A0A2J6L6I9_LACSA Unreviewed; 431 AA.
AC A0A2J6L6I9;
DT 28-MAR-2018, integrated into UniProtKB/TrEMBL.
DT 28-MAR-2018, sequence version 1.
DT 27-MAR-2024, entry version 16.
DE RecName: Full=Zinc finger PHD-type domain-containing protein {ECO:0000259|SMART:SM00249};
GN ORFNames=LSAT_6X80821 {ECO:0000313|EMBL:PLY82917.1};
OS Lactuca sativa (Garden lettuce).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; campanulids; Asterales; Asteraceae; Cichorioideae; Cichorieae;
OC Lactucinae; Lactuca.
OX NCBI_TaxID=4236 {ECO:0000313|EMBL:PLY82917.1};
RN [1] {ECO:0000313|EMBL:PLY82917.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=28401891; DOI=10.1038/ncomms14953;
RA Reyes-Chin-Wo S., Wang Z., Yang X., Kozik A., Arikit S., Song C., Xia L.,
RA Froenicke L., Lavelle D.O., Truco M.J., Xia R., Zhu S., Xu C., Xu H.,
RA Xu X., Cox K., Korf I., Meyers B.C., Michelmore R.W.;
RT "Genome assembly with in vitro proximity ligation data and whole-genome
RT triplication in lettuce.";
RL Nat. Commun. 8:14953-14953(2017).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PLY82917.1}.
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DR EMBL; NBSK01004967; PLY82917.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2J6L6I9; -.
DR EnsemblPlants; rna-gnl|WGS:NBSK|LSAT_6X80821_mrna; cds-PLY82917.1; gene-LSAT_6X80821.
DR Gramene; rna-gnl|WGS:NBSK|LSAT_6X80821_mrna; cds-PLY82917.1; gene-LSAT_6X80821.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR InterPro; IPR046349; C1-like_sf.
DR InterPro; IPR004146; DC1.
DR InterPro; IPR001965; Znf_PHD.
DR PANTHER; PTHR32410; CYSTEINE/HISTIDINE-RICH C1 DOMAIN FAMILY PROTEIN; 1.
DR PANTHER; PTHR32410:SF163; DC1 DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF03107; C1_2; 4.
DR SMART; SM00249; PHD; 2.
DR SUPFAM; SSF57889; Cysteine-rich domain; 4.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771}.
FT DOMAIN 62..126
FT /note="Zinc finger PHD-type"
FT /evidence="ECO:0000259|SMART:SM00249"
FT DOMAIN 333..385
FT /note="Zinc finger PHD-type"
FT /evidence="ECO:0000259|SMART:SM00249"
SQ SEQUENCE 431 AA; 50299 MW; EE92872EF2C3C50D CRC64;
MFMYTFKEDY IYIFKACIDC CVSRITRKAE ADAIKEAGRI KIEHEGHPQH TLSLKLRPNV
VLCDACKAKD EGLFYECDSC DFWIHKTSAS LAHTIDLPHH PNHKLVLVYS LQEIFFSFWY
YCEICNAYIQ RNEWLYHCAN CRYFVDIRCA LNAEQPSGNL SDPIEVCQGY VRPLTLPYYS
CKDGCSFALH KYCAELPLKL QHPLHQDHSL VLINAAGRGR NDECIGCFSD GNMYLYKCET
CEFYLDFNCA FLPKTIKHKS HKHPLIQVVD PEPLCNACDK YSRGISYACK SCDFILDMYC
AMRSPHSLAH RYCKGHKIPL MYPPIMDHPE DFYCDICEKE MHPKLPLYYC HKCKNSFHLD
CISRIDYQAN MLYKGTRNVS CHKHQLTFVR RKKTPKYVCF VCNQDINGYL ILECPASVCN
FNICYQCHLR K
//
