ID A0A2J6L9Y4_LACSA Unreviewed; 735 AA.
AC A0A2J6L9Y4;
DT 28-MAR-2018, integrated into UniProtKB/TrEMBL.
DT 28-MAR-2018, sequence version 1.
DT 24-JAN-2024, entry version 19.
DE RecName: Full=PB1 domain-containing protein {ECO:0000259|PROSITE:PS51745};
GN ORFNames=LSAT_6X115720 {ECO:0000313|EMBL:PLY84107.1};
OS Lactuca sativa (Garden lettuce).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; campanulids; Asterales; Asteraceae; Cichorioideae; Cichorieae;
OC Lactucinae; Lactuca.
OX NCBI_TaxID=4236 {ECO:0000313|EMBL:PLY84107.1};
RN [1] {ECO:0000313|EMBL:PLY84107.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=28401891; DOI=10.1038/ncomms14953;
RA Reyes-Chin-Wo S., Wang Z., Yang X., Kozik A., Arikit S., Song C., Xia L.,
RA Froenicke L., Lavelle D.O., Truco M.J., Xia R., Zhu S., Xu C., Xu H.,
RA Xu X., Cox K., Korf I., Meyers B.C., Michelmore R.W.;
RT "Genome assembly with in vitro proximity ligation data and whole-genome
RT triplication in lettuce.";
RL Nat. Commun. 8:14953-14953(2017).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PLY84107.1}.
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DR EMBL; NBSK01004692; PLY84107.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2J6L9Y4; -.
DR STRING; 4236.A0A2J6L9Y4; -.
DR EnsemblPlants; rna-gnl|WGS:NBSK|LSAT_6X115720_mrna; cds-PLY84107.1; gene-LSAT_6X115720.
DR Gramene; rna-gnl|WGS:NBSK|LSAT_6X115720_mrna; cds-PLY84107.1; gene-LSAT_6X115720.
DR OrthoDB; 5479011at2759; -.
DR CDD; cd05992; PB1; 1.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 1.
DR InterPro; IPR000270; PB1_dom.
DR InterPro; IPR044517; PHOX1-4.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR InterPro; IPR019734; TPR_repeat.
DR PANTHER; PTHR46183; PROTEIN CLMP1; 1.
DR PANTHER; PTHR46183:SF4; PROTEIN PHOX4; 1.
DR Pfam; PF00564; PB1; 1.
DR SMART; SM00666; PB1; 1.
DR SMART; SM00028; TPR; 3.
DR SUPFAM; SSF54277; CAD & PB1 domains; 1.
DR SUPFAM; SSF48452; TPR-like; 1.
DR PROSITE; PS51745; PB1; 1.
DR PROSITE; PS50005; TPR; 2.
PE 4: Predicted;
KW TPR repeat {ECO:0000256|PROSITE-ProRule:PRU00339}.
FT REPEAT 41..74
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT REPEAT 115..148
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT DOMAIN 272..351
FT /note="PB1"
FT /evidence="ECO:0000259|PROSITE:PS51745"
FT REGION 1..27
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 202..249
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 9..27
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 735 AA; 83532 MW; DBCFD5C049FE580E CRC64;
MGKPTGKKKL QAGVEKVVKQ NKAERSSKQI DEDTAVFIQM SQELKEEGNK LFQKRDNEGA
MLKYEKALKL LPGNHIDVAS LRTNMAGCYM QMGIGEYPRA IHECNLALEV APKYSKALLK
RAKCYETLNK FEWALRDVRL VLGMEPNNVT AHEIEDSVKK AIQGKGLKLE DIEAVLSHES
NDPSAVKVVK VLKEKPKRRK NIRVDRKDVE NGNNSKIEEV TESKSEESKE IKGEDAKDRK
NKVKRVRDKR ANHVEEKKVE GTNGIKEEIV ATRTVKLVLG DDIRSAQLPS DCSIGFVREI
VWDRFPGLEG ILIKYKDQEG DLITITTTSE LRLAEASSDP QGSLRLYLVE VSPDKEPSYE
GFTNDGFHNT NSLKSSVSEN GNIGQMSQIS QIKEVEKVTT CVEDWIVRFA RMFKDHVGFE
SDSYLDLHEL GMDVYAEAIE ETVTTEDAQK LFDIAGGKFQ EMAALGLFNW GNVHMNKARK
WVIFAEDGTN ESKHEKVKTG YEWAEKEYVK AGRRYEEALK IKPDFFEGFL ALGQQQFEQA
KLSWSYAVGT KTSLDAKILE LYNKAEDSME HGMQIWEELE EQRLNGLSLY DKYRDDLVKL
GLEGFLKEVS TDEAAEQAAH LRSQMYILWG TLLYERSVVE FKMDLSAWEE SLAASVEKFE
LAGASPTDLA VIIKNHCSNG TASAGLGFKI DEIVQAWNEM YEVKRWQTGV PSFRLEPLFR
RRVSKLHSHM EMEHH
//
